Index

_

__call__() (PyNucleus_base.factory.factory method) (PyNucleus_base.ip_norm.complexipBase method) (PyNucleus_base.ip_norm.complexNormBase method) (PyNucleus_base.ip_norm.ipBase method) (PyNucleus_base.ip_norm.normBase method) (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) (PyNucleus_base.solvers.complex_solver method) (PyNucleus_base.solvers.solver method) (PyNucleus_base.utilsFem.propertyBuilder method) (PyNucleus_base.utilsFem.TimerManager method) (PyNucleus_fem.DoFMaps.shapeFunction method) (PyNucleus_fem.femCy.local_matrix_t method) (PyNucleus_fem.femCy.multi_function method) (PyNucleus_fem.functions.complexFunction method) (PyNucleus_fem.functions.function method) (PyNucleus_fem.functions.matrixFunction method) (PyNucleus_fem.functions.vectorFunction method) (PyNucleus_fem.meshCy.gradedHypercubeTransformer method) (PyNucleus_fem.meshCy.gradedMeshTransformer method) (PyNucleus_fem.meshCy.meshTransformer method) (PyNucleus_fem.meshCy.multiIntervalMeshTransformer method) (PyNucleus_fem.meshCy.radialMeshTransformer method) (PyNucleus_fem.meshPartitioning.metisDofPartitioner method) (PyNucleus_fem.meshPartitioning.regularDofPartitioner method) (PyNucleus_fem.meshPartitioning.regularMeshPartitioner method) (PyNucleus_multilevelSolver.smoothers.Complexsmoother method) (PyNucleus_multilevelSolver.smoothers.smoother method) (PyNucleus_nl.kernelNormalization.memoizedFun method) (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.Kernel method) (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction method) (PyNucleus_nl.twoPointFunctions.twoPointFunction method) __init__() (in module PyNucleus_nl.nonlocalBuilder) (PyNucleus_base.convergence.convergenceClient method) (PyNucleus_base.convergence.convergenceCriterion method) (PyNucleus_base.convergence.convergenceMaster method) (PyNucleus_base.convergence.noOpConvergenceCriterion method) (PyNucleus_base.convergence.noOpConvergenceMaster method) (PyNucleus_base.convergence.synchronousConvergenceClient method) (PyNucleus_base.convergence.synchronousConvergenceClientSubcomm method) (PyNucleus_base.convergence.synchronousConvergenceCriterion method) (PyNucleus_base.convergence.synchronousConvergenceMaster method) (PyNucleus_base.driver method) (PyNucleus_base.factory.factory method) (PyNucleus_base.intTuple.productIterator method) (PyNucleus_base.ip_norm.complexipBase method) (PyNucleus_base.ip_norm.complexNormBase method) (PyNucleus_base.ip_norm.ip_distributed method) (PyNucleus_base.ip_norm.ip_distributed_nonoverlapping method) (PyNucleus_base.ip_norm.ipBase method) (PyNucleus_base.ip_norm.norm_distributed method) (PyNucleus_base.ip_norm.norm_distributed_nonoverlapping method) (PyNucleus_base.ip_norm.normBase method) (PyNucleus_base.ip_norm.wrapRealInnerToComplex method) (PyNucleus_base.ip_norm.wrapRealNormToComplex method) (PyNucleus_base.linalg.ILU_solver method) (PyNucleus_base.linear_operators.blockDiagonalOperator method) (PyNucleus_base.linear_operators.blockLowerInverse method) (PyNucleus_base.linear_operators.blockOperator method) (PyNucleus_base.linear_operators.blockUpperInverse method) (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_SubBlock_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexdiagonalOperator method) (PyNucleus_base.linear_operators.ComplexIJOperator method) (PyNucleus_base.linear_operators.ComplexinvDiagonal method) (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexLinearOperator_wrapper method) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.debugOperator method) (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.Dense_LinearOperator method) (PyNucleus_base.linear_operators.Dense_SubBlock_LinearOperator method) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator method) (PyNucleus_base.linear_operators.diagonalOperator method) (PyNucleus_base.linear_operators.HelmholtzShiftOperator method) (PyNucleus_base.linear_operators.identityOperator method) (PyNucleus_base.linear_operators.IJOperator method) (PyNucleus_base.linear_operators.interpolationOperator method) (PyNucleus_base.linear_operators.invDiagonal method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.LinearOperator_wrapper method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.linear_operators.Multiply_Linear_Operator method) (PyNucleus_base.linear_operators.nullOperator method) (PyNucleus_base.linear_operators.Product_Linear_Operator method) (PyNucleus_base.linear_operators.prolongationOp method) (PyNucleus_base.linear_operators.restrictionOp method) (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.linear_operators.split_CSR_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.sumMultiplyOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) (PyNucleus_base.linear_operators.Transpose_Linear_Operator method) (PyNucleus_base.linear_operators.Triple_Product_Linear_Operator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) (PyNucleus_base.linear_operators.wrapRealToComplex method) (PyNucleus_base.linear_operators.wrapRealToComplexCSR method) (PyNucleus_base.performanceLogger.FakePLogger method) (PyNucleus_base.performanceLogger.FakeTimer method) (PyNucleus_base.performanceLogger.LoggingPLogger method) (PyNucleus_base.performanceLogger.LoggingTimer method) (PyNucleus_base.performanceLogger.PLogger method) (PyNucleus_base.performanceLogger.Timer method) (PyNucleus_base.plot_utils.movieCreator method) (PyNucleus_base.problem method) (PyNucleus_base.solver_factory.solverFactory method) (PyNucleus_base.solvers.bicgstab_solver method) (PyNucleus_base.solvers.cg_solver method) (PyNucleus_base.solvers.chol_solver method) (PyNucleus_base.solvers.complex_gmres_solver method) (PyNucleus_base.solvers.complex_iterative_solver method) (PyNucleus_base.solvers.complex_krylov_solver method) (PyNucleus_base.solvers.complex_lu_solver method) (PyNucleus_base.solvers.complex_preconditioner method) (PyNucleus_base.solvers.complex_solver method) (PyNucleus_base.solvers.gmres_solver method) (PyNucleus_base.solvers.ichol_solver method) (PyNucleus_base.solvers.ilu_solver method) (PyNucleus_base.solvers.iterative_solver method) (PyNucleus_base.solvers.jacobi_solver method) (PyNucleus_base.solvers.krylov_solver method) (PyNucleus_base.solvers.lu_solver method) (PyNucleus_base.solvers.noop_solver method) (PyNucleus_base.solvers.preconditioner method) (PyNucleus_base.solvers.solver method) (PyNucleus_base.sparseGraph.combinedOperator method) (PyNucleus_base.sparsityPattern.sparsityPattern method) (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.arrayIndexSetIterator method) (PyNucleus_base.tupleDict.bitArray method) (PyNucleus_base.tupleDict.bitArrayIterator method) (PyNucleus_base.tupleDict.indexSetIterator method) (PyNucleus_base.tupleDict.rangeIndexSet method) (PyNucleus_base.tupleDict.rangeIndexSetIterator method) (PyNucleus_base.tupleDict.tupleDictINDEX method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method) (PyNucleus_base.utilsFem.classWithComputedDependencies method) (PyNucleus_base.utilsFem.driver method) (PyNucleus_base.utilsFem.driverAddon method) (PyNucleus_base.utilsFem.driverArgGroup method) (PyNucleus_base.utilsFem.exitHandler method) (PyNucleus_base.utilsFem.MPIFileHandler method) (PyNucleus_base.utilsFem.outputGroup method) (PyNucleus_base.utilsFem.outputParam method) (PyNucleus_base.utilsFem.parametrizedArg method) (PyNucleus_base.utilsFem.problem method) (PyNucleus_base.utilsFem.propertyBuilder method) (PyNucleus_base.utilsFem.seriesOutputGroup method) (PyNucleus_base.utilsFem.statisticOutputGroup method) (PyNucleus_base.utilsFem.TimerManager method) (PyNucleus_base.utilsFem.timerOutputGroup method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlap method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapBlocking method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedGet method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPut method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPutLockAll method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapPersistent method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) (PyNucleus_fem.boundaryLayerCy.boundaryLayer method) (PyNucleus_fem.distributed_operators.ComplexCSR_DistributedLinearOperator method) (PyNucleus_fem.distributed_operators.ComplexDistributedLinearOperator method) (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator method) (PyNucleus_fem.distributed_operators.CSR_DistributedLinearOperator method) (PyNucleus_fem.distributed_operators.DistributedLinearOperator method) (PyNucleus_fem.distributed_operators.RowDistributedOperator method) (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.DoFMaps.elementSizeFunction method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.DoFMaps.globalShapeFunction method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) (PyNucleus_fem.DoFMaps.N1e_DoFMap method) (PyNucleus_fem.DoFMaps.P0_DoFMap method) (PyNucleus_fem.DoFMaps.P1_DoFMap method) (PyNucleus_fem.DoFMaps.P2_DoFMap method) (PyNucleus_fem.DoFMaps.P3_DoFMap method) (PyNucleus_fem.DoFMaps.Product_DoFMap method) (PyNucleus_fem.DoFMaps.productSpaceShapeFunction method) (PyNucleus_fem.DoFMaps.shapeFunction method) (PyNucleus_fem.DoFMaps.shapeFunctionN1e method) (PyNucleus_fem.DoFMaps.shapeFunctionP0 method) (PyNucleus_fem.DoFMaps.shapeFunctionP1 method) (PyNucleus_fem.DoFMaps.shapeFunctionP2_edge method) (PyNucleus_fem.DoFMaps.shapeFunctionP2_vertex method) (PyNucleus_fem.DoFMaps.shapeFunctionP3_edge method) (PyNucleus_fem.DoFMaps.shapeFunctionP3_face method) (PyNucleus_fem.DoFMaps.shapeFunctionP3_vertex method) (PyNucleus_fem.femCy.brusselator method) (PyNucleus_fem.femCy.CahnHilliard_F method) (PyNucleus_fem.femCy.CahnHilliard_F_prime method) (PyNucleus_fem.femCy.curlcurl_2d_sym method) (PyNucleus_fem.femCy.curlcurl_2d_sym_N1e method) (PyNucleus_fem.femCy.discrete_curl_2d_P0_N1e method) (PyNucleus_fem.femCy.discrete_gradient_2d_N1e_P1 method) (PyNucleus_fem.femCy.div_div_2d method) (PyNucleus_fem.femCy.drift_1d method) (PyNucleus_fem.femCy.drift_1d_P1 method) (PyNucleus_fem.femCy.drift_2d method) (PyNucleus_fem.femCy.drift_2d_P1 method) (PyNucleus_fem.femCy.elasticity_1d_P1 method) (PyNucleus_fem.femCy.elasticity_2d_P1 method) (PyNucleus_fem.femCy.elasticity_3d_P1 method) (PyNucleus_fem.femCy.gray_scott method) (PyNucleus_fem.femCy.gray_scott_gradient method) (PyNucleus_fem.femCy.local_matrix_t method) (PyNucleus_fem.femCy.mass_1d method) (PyNucleus_fem.femCy.mass_2d method) (PyNucleus_fem.femCy.mass_2d_sym_N1e method) (PyNucleus_fem.femCy.mass_3d method) (PyNucleus_fem.femCy.mass_quadrature_matrix method) (PyNucleus_fem.femCy.matrixFreeOperator method) (PyNucleus_fem.femCy.multi_function method) (PyNucleus_fem.femCy.power method) (PyNucleus_fem.femCy.scalar_coefficient_stiffness_1d_sym_P1 method) (PyNucleus_fem.femCy.scalar_coefficient_stiffness_1d_sym_P2 method) (PyNucleus_fem.femCy.scalar_coefficient_stiffness_2d_sym_P1 method) (PyNucleus_fem.femCy.scalar_coefficient_stiffness_2d_sym_P2 method) (PyNucleus_fem.femCy.scalar_coefficient_stiffness_3d_sym_P1 method) (PyNucleus_fem.femCy.scalar_coefficient_stiffness_3d_sym_P2 method) (PyNucleus_fem.femCy.simplexComputations2D method) (PyNucleus_fem.femCy.simplexComputations3D method) (PyNucleus_fem.femCy.stiffness_1d_sym method) (PyNucleus_fem.femCy.stiffness_2d_sym method) (PyNucleus_fem.femCy.stiffness_2d_sym_anisotropic2_P1 method) (PyNucleus_fem.femCy.stiffness_2d_sym_anisotropic3_P1 method) (PyNucleus_fem.femCy.stiffness_2d_sym_anisotropic_P1 method) (PyNucleus_fem.femCy.stiffness_3d_sym method) (PyNucleus_fem.femCy.stiffness_quadrature_matrix method) (PyNucleus_fem.functions.affineFunction method) (PyNucleus_fem.functions.complexLambda method) (PyNucleus_fem.functions.complexMulFunction method) (PyNucleus_fem.functions.complexSumFunction method) (PyNucleus_fem.functions.componentVectorFunction method) (PyNucleus_fem.functions.constant method) (PyNucleus_fem.functions.constantMatrixFunction method) (PyNucleus_fem.functions.coordinate method) (PyNucleus_fem.functions.eigfun_disc method) (PyNucleus_fem.functions.eigfun_disc_deriv_x method) (PyNucleus_fem.functions.eigfun_disc_deriv_y method) (PyNucleus_fem.functions.expDiffusivity method) (PyNucleus_fem.functions.fractalDiffusivity method) (PyNucleus_fem.functions.imag method) (PyNucleus_fem.functions.inclusions method) (PyNucleus_fem.functions.inclusionsHong method) (PyNucleus_fem.functions.indicatorFunctor method) (PyNucleus_fem.functions.Lambda method) (PyNucleus_fem.functions.logDiffusion1D method) (PyNucleus_fem.functions.logDiffusion2D method) (PyNucleus_fem.functions.lookupFunction1D method) (PyNucleus_fem.functions.lookupFunctionTensor1DNew method) (PyNucleus_fem.functions.lookupFunctionTensor2D method) (PyNucleus_fem.functions.lookupFunctionTensor2DNew method) (PyNucleus_fem.functions.lookupFunctionTensor2DNewSym method) (PyNucleus_fem.functions.lookupFunctionTensor3D method) (PyNucleus_fem.functions.lookupFunctionTensor3DNew method) (PyNucleus_fem.functions.lookupFunctionTensor3DNewSym method) (PyNucleus_fem.functions.matrixFunction method) (PyNucleus_fem.functions.monomial method) (PyNucleus_fem.functions.motorPermeability method) (PyNucleus_fem.functions.mulFunction method) (PyNucleus_fem.functions.mulVectorFunction method) (PyNucleus_fem.functions.periodicityFunctor method) (PyNucleus_fem.functions.prodFunction method) (PyNucleus_fem.functions.proj method) (PyNucleus_fem.functions.radialIndicator method) (PyNucleus_fem.functions.real method) (PyNucleus_fem.functions.rhsBoundarySingularity2D method) (PyNucleus_fem.functions.rhsFractional1D method) (PyNucleus_fem.functions.rhsFractional2D method) (PyNucleus_fem.functions.rhsFractional2Dcombination method) (PyNucleus_fem.functions.rhsFractionalBrusselator_U method) (PyNucleus_fem.functions.rhsFractionalBrusselator_V method) (PyNucleus_fem.functions.rhsFunCos1DHeat method) (PyNucleus_fem.functions.rhsFunCos2DHeat method) (PyNucleus_fem.functions.rhsFunCos2DNonlinear method) (PyNucleus_fem.functions.rhsFunCos2DNonlinear_U method) (PyNucleus_fem.functions.rhsFunCos2DNonlinear_V method) (PyNucleus_fem.functions.rhsFunSource1D method) (PyNucleus_fem.functions.rhsFunSource2D method) (PyNucleus_fem.functions.rhsHr1D method) (PyNucleus_fem.functions.rhsHr2D method) (PyNucleus_fem.functions.rhsHr2Ddisk method) (PyNucleus_fem.functions.rhsHr3D method) (PyNucleus_fem.functions.rhsMotor method) (PyNucleus_fem.functions.rhsTestFractional_U method) (PyNucleus_fem.functions.rhsTestFractional_V method) (PyNucleus_fem.functions.rhsTestGrayScott2D_U method) (PyNucleus_fem.functions.rhsTestGrayScott2D_V method) (PyNucleus_fem.functions.shiftScaleFunctor method) (PyNucleus_fem.functions.simpleAnisotropy method) (PyNucleus_fem.functions.simpleAnisotropy2 method) (PyNucleus_fem.functions.solBoundarySingularity2D method) (PyNucleus_fem.functions.solCos1DHeat method) (PyNucleus_fem.functions.solCos2DHeat method) (PyNucleus_fem.functions.solFractional method) (PyNucleus_fem.functions.solFractional1D method) (PyNucleus_fem.functions.solFractional2D method) (PyNucleus_fem.functions.solFractional2Dcombination method) (PyNucleus_fem.functions.solFractionalDerivative method) (PyNucleus_fem.functions.sphericalIntegral method) (PyNucleus_fem.functions.sqrtAffineFunction method) (PyNucleus_fem.functions.squareIndicator method) (PyNucleus_fem.functions.sumFunction method) (PyNucleus_fem.functions.sumVectorFunction method) (PyNucleus_fem.functions.vectorFunction method) (PyNucleus_fem.functions.vectorNorm method) (PyNucleus_fem.functions.waveFunction method) (PyNucleus_fem.functions.wrapRealToComplexFunction method) (PyNucleus_fem.mesh.meshFactory method) (PyNucleus_fem.mesh.meshNd method) (PyNucleus_fem.mesh.plotManager method) (PyNucleus_fem.meshConstruction.circle method) (PyNucleus_fem.meshConstruction.circularSegment method) (PyNucleus_fem.meshConstruction.line method) (PyNucleus_fem.meshConstruction.segment method) (PyNucleus_fem.meshConstruction.transformationRestriction method) (PyNucleus_fem.meshCy.cellFinder method) (PyNucleus_fem.meshCy.cellFinder2 method) (PyNucleus_fem.meshCy.faceVals method) (PyNucleus_fem.meshCy.gradedHypercubeTransformer method) (PyNucleus_fem.meshCy.gradedMeshTransformer method) (PyNucleus_fem.meshCy.meshBase method) (PyNucleus_fem.meshCy.meshTransformer method) (PyNucleus_fem.meshCy.multiIntervalMeshTransformer method) (PyNucleus_fem.meshCy.radialMeshTransformer method) (PyNucleus_fem.meshOverlaps.dofCheckerArray method) (PyNucleus_fem.meshOverlaps.dofCheckerSet method) (PyNucleus_fem.meshOverlaps.interfaceManager method) (PyNucleus_fem.meshOverlaps.meshInterface method) (PyNucleus_fem.meshOverlaps.meshOverlap method) (PyNucleus_fem.meshOverlaps.overlapManager method) (PyNucleus_fem.meshOverlaps.sharedMesh method) (PyNucleus_fem.meshOverlaps.sharedMeshManager method) (PyNucleus_fem.meshOverlaps.splitSharedMeshManager method) (PyNucleus_fem.meshOverlaps.vertexMap method) (PyNucleus_fem.meshOverlaps.vertexMapManager method) (PyNucleus_fem.meshPartitioning.dofPartitioner method) (PyNucleus_fem.meshPartitioning.meshPartitioner method) (PyNucleus_fem.meshPartitioning.regularVertexPartitioner method) (PyNucleus_fem.meshPartitioning.vertexPartitioner method) (PyNucleus_fem.P0_DoFMap method) (PyNucleus_fem.P1_DoFMap method) (PyNucleus_fem.P2_DoFMap method) (PyNucleus_fem.P3_DoFMap method) (PyNucleus_fem.quadrature.doubleSimplexQuadratureRule method) (PyNucleus_fem.quadrature.Gauss method) (PyNucleus_fem.quadrature.Gauss1D method) (PyNucleus_fem.quadrature.Gauss2D method) (PyNucleus_fem.quadrature.Gauss3D method) (PyNucleus_fem.quadrature.GaussJacobi method) (PyNucleus_fem.quadrature.quadQuadratureRule method) (PyNucleus_fem.quadrature.quadratureRule method) (PyNucleus_fem.quadrature.simplexDuffyTransformation method) (PyNucleus_fem.quadrature.simplexJaskowiecSukumar method) (PyNucleus_fem.quadrature.simplexQuadratureRule method) (PyNucleus_fem.quadrature.simplexXiaoGimbutas method) (PyNucleus_fem.quadrature.sphericalQuadRule method) (PyNucleus_fem.quadrature.sphericalQuadRule1D method) (PyNucleus_fem.quadrature.sphericalQuadRule2D method) (PyNucleus_fem.quadrature.transformQuadratureRule method) (PyNucleus_fem.repartitioner.interfaceProcessor method) (PyNucleus_fem.repartitioner.localInterfaceManager method) (PyNucleus_fem.repartitioner.Repartitioner method) (PyNucleus_fem.simplexMapper.simplexMapper method) (PyNucleus_fem.simplexMapper.simplexMapper0D method) (PyNucleus_fem.simplexMapper.simplexMapper1D method) (PyNucleus_fem.simplexMapper.simplexMapper2D method) (PyNucleus_fem.simplexMapper.simplexMapper3D method) (PyNucleus_fem.splitting.dofmapSplitter method) (PyNucleus_fem.splitting.meshSplitter method) (PyNucleus_fem.splitting.meshSplitter2 method) (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver method) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver method) (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) (PyNucleus_multilevelSolver.connectors.inputConnector method) (PyNucleus_multilevelSolver.connectors.pCoarsenConnector method) (PyNucleus_multilevelSolver.connectors.repartitionConnector method) (PyNucleus_multilevelSolver.hierarchies.EmptyHierarchy method) (PyNucleus_multilevelSolver.hierarchies.hierarchy method) (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) (PyNucleus_multilevelSolver.hierarchies.pCoarsenHierarchy method) (PyNucleus_multilevelSolver.levels.algebraicLevel method) (PyNucleus_multilevelSolver.levels.algebraicLevelBase method) (PyNucleus_multilevelSolver.levels.level method) (PyNucleus_multilevelSolver.levels.meshLevel method) (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory method) (PyNucleus_multilevelSolver.multigrid.Complexmultigrid method) (PyNucleus_multilevelSolver.multigrid.ComplexmultigridPreconditioner method) (PyNucleus_multilevelSolver.multigrid.levelMemory method) (PyNucleus_multilevelSolver.multigrid.multigrid method) (PyNucleus_multilevelSolver.multigrid.multigridPreconditioner method) (PyNucleus_multilevelSolver.smoothers.blockJacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.blockJacobiSmoother method) (PyNucleus_multilevelSolver.smoothers.chebyshevPreconditioner method) (PyNucleus_multilevelSolver.smoothers.chebyshevSmoother method) (PyNucleus_multilevelSolver.smoothers.ComplexblockJacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.ComplexblockJacobiSmoother method) (PyNucleus_multilevelSolver.smoothers.ComplexgmresSmoother method) (PyNucleus_multilevelSolver.smoothers.ComplexjacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.ComplexjacobiSmoother method) (PyNucleus_multilevelSolver.smoothers.Complexpreconditioner method) (PyNucleus_multilevelSolver.smoothers.ComplexseparableSmoother method) (PyNucleus_multilevelSolver.smoothers.Complexsmoother method) (PyNucleus_multilevelSolver.smoothers.flexibleSmoother method) (PyNucleus_multilevelSolver.smoothers.gaussSeidelSmoother method) (PyNucleus_multilevelSolver.smoothers.gmresSmoother method) (PyNucleus_multilevelSolver.smoothers.iluPreconditioner method) (PyNucleus_multilevelSolver.smoothers.iluSmoother method) (PyNucleus_multilevelSolver.smoothers.jacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.jacobiSmoother method) (PyNucleus_multilevelSolver.smoothers.preconditioner method) (PyNucleus_multilevelSolver.smoothers.separableSmoother method) (PyNucleus_multilevelSolver.smoothers.smoother method) (PyNucleus_multilevelSolver.smoothers.sorPreconditioner method) (PyNucleus_multilevelSolver.smoothers.sorSmoother method) (PyNucleus_multilevelSolver.smoothers.ssorPreconditioner method) (PyNucleus_multilevelSolver.smoothers.ssorSmoother method) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_globalData method) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData method) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator method) (PyNucleus_nl.clusterMethodCy.exactSphericalIntegral2D method) (PyNucleus_nl.clusterMethodCy.farFieldClusterPair method) (PyNucleus_nl.clusterMethodCy.H2Matrix method) (PyNucleus_nl.clusterMethodCy.productIterator method) (PyNucleus_nl.clusterMethodCy.transferMatrixBuilder method) (PyNucleus_nl.clusterMethodCy.tree_node method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix method) (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1D method) (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1D_boundary method) (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1D_nonsym method) (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1DZeroExterior method) (PyNucleus_nl.fractionalLaplacian1D.singularityCancelationQuadRule1D method) (PyNucleus_nl.fractionalLaplacian1D.singularityCancelationQuadRule1D_boundary method) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D method) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_boundary method) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_nonsym method) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2DZeroExterior method) (PyNucleus_nl.fractionalLaplacian2D.singularityCancelationQuadRule2D method) (PyNucleus_nl.fractionalLaplacian2D.singularityCancelationQuadRule2D_boundary method) (PyNucleus_nl.fractionalOrders.constantExtended method) (PyNucleus_nl.fractionalOrders.constantNonSymFractionalOrder method) (PyNucleus_nl.fractionalOrders.constFractionalOrder method) (PyNucleus_nl.fractionalOrders.feFractionalOrder method) (PyNucleus_nl.fractionalOrders.fractionalOrderBase method) (PyNucleus_nl.fractionalOrders.innerOuterFractionalOrder method) (PyNucleus_nl.fractionalOrders.islandsFractionalOrder method) (PyNucleus_nl.fractionalOrders.lambdaFractionalOrder method) (PyNucleus_nl.fractionalOrders.layersFractionalOrder method) (PyNucleus_nl.fractionalOrders.leftRightFractionalOrder method) (PyNucleus_nl.fractionalOrders.linearLeftRightFractionalOrder method) (PyNucleus_nl.fractionalOrders.linearStep method) (PyNucleus_nl.fractionalOrders.lookupExtended method) (PyNucleus_nl.fractionalOrders.piecewiseConstantFractionalOrder method) (PyNucleus_nl.fractionalOrders.singleVariableTwoPointFunction method) (PyNucleus_nl.fractionalOrders.singleVariableUnsymmetricFractionalOrder method) (PyNucleus_nl.fractionalOrders.smoothedInnerOuterFractionalOrder method) (PyNucleus_nl.fractionalOrders.smoothedLeftRightFractionalOrder method) (PyNucleus_nl.fractionalOrders.smoothLeftRight method) (PyNucleus_nl.fractionalOrders.smoothStep method) (PyNucleus_nl.fractionalOrders.smoothStepRadial method) (PyNucleus_nl.fractionalOrders.sumFractionalOrder method) (PyNucleus_nl.fractionalOrders.variableConstFractionalOrder method) (PyNucleus_nl.fractionalOrders.variableFractionalOrder method) (PyNucleus_nl.interactionDomains.ball1_barycenter method) (PyNucleus_nl.interactionDomains.ball1_retriangulation method) (PyNucleus_nl.interactionDomains.ball2_barycenter method) (PyNucleus_nl.interactionDomains.ball2_dilation_barycenter method) (PyNucleus_nl.interactionDomains.ball2_dilation_retriangulation method) (PyNucleus_nl.interactionDomains.ball2_retriangulation method) (PyNucleus_nl.interactionDomains.ball2Complement method) (PyNucleus_nl.interactionDomains.ballInf_barycenter method) (PyNucleus_nl.interactionDomains.ballInf_retriangulation method) (PyNucleus_nl.interactionDomains.barycenterDomain method) (PyNucleus_nl.interactionDomains.ellipse_barycenter method) (PyNucleus_nl.interactionDomains.ellipse_retriangulation method) (PyNucleus_nl.interactionDomains.ellipseTransform method) (PyNucleus_nl.interactionDomains.fullSpace method) (PyNucleus_nl.interactionDomains.interactionDomain method) (PyNucleus_nl.interactionDomains.linearTransformInteraction method) (PyNucleus_nl.interactionDomains.retriangulationDomain method) (PyNucleus_nl.kernelNormalization.constantFractionalLaplacianScaling method) (PyNucleus_nl.kernelNormalization.constantFractionalLaplacianScalingDerivative method) (PyNucleus_nl.kernelNormalization.constantIntegrableScaling method) (PyNucleus_nl.kernelNormalization.memoizedFun method) (PyNucleus_nl.kernelNormalization.variableFractionalLaplacianScaling method) (PyNucleus_nl.kernelNormalization.variableFractionalLaplacianScalingWithDifferentHorizon method) (PyNucleus_nl.kernelNormalization.variableIntegrableScaling method) (PyNucleus_nl.kernelNormalization.variableIntegrableScalingWithDifferentHorizon method) (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.FractionalKernel method) (PyNucleus_nl.kernelsCy.Kernel method) (PyNucleus_nl.kernelsCy.RangedFractionalKernel method) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel method) (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.nonlocalLaplacian1D method) (PyNucleus_nl.nonlocalOperator.nonlocalLaplacian2D method) (PyNucleus_nl.nonlocalOperator.nonlocalOperator method) (PyNucleus_nl.nonlocalOperator.PermutationIndexer method) (PyNucleus_nl.nonlocalOperator.specialQuadRule method) (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalBaseProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalMeshFactoryClass method) (PyNucleus_nl.nonlocalProblems.transientFractionalProblem method) (PyNucleus_nl.twoPointFunctions.ComplexconstantTwoPoint method) (PyNucleus_nl.twoPointFunctions.ComplexfixedTwoPointFunction method) (PyNucleus_nl.twoPointFunctions.ComplexlookupTwoPoint method) (PyNucleus_nl.twoPointFunctions.ComplexparametrizedTwoPointFunction method) (PyNucleus_nl.twoPointFunctions.ComplexproductParametrizedTwoPoint method) (PyNucleus_nl.twoPointFunctions.ComplexproductTwoPoint method) (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction method) (PyNucleus_nl.twoPointFunctions.constantTwoPoint method) (PyNucleus_nl.twoPointFunctions.fixedTwoPointFunction method) (PyNucleus_nl.twoPointFunctions.interfaceTwoPoint method) (PyNucleus_nl.twoPointFunctions.inverseTwoPoint method) (PyNucleus_nl.twoPointFunctions.lambdaTwoPoint method) (PyNucleus_nl.twoPointFunctions.leftRightTwoPoint method) (PyNucleus_nl.twoPointFunctions.lookupTwoPoint method) (PyNucleus_nl.twoPointFunctions.matrixTwoPoint method) (PyNucleus_nl.twoPointFunctions.parametrizedTwoPointFunction method) (PyNucleus_nl.twoPointFunctions.productParametrizedTwoPoint method) (PyNucleus_nl.twoPointFunctions.productTwoPoint method) (PyNucleus_nl.twoPointFunctions.smoothedLeftRightTwoPoint method) (PyNucleus_nl.twoPointFunctions.temperedTwoPoint method) (PyNucleus_nl.twoPointFunctions.tensorTwoPoint method) (PyNucleus_nl.twoPointFunctions.twoPointFunction method) (PyNucleus_nl.twoPointFunctions.unsymTwoPoint method)

A

A (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator attribute) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator attribute) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator attribute) (PyNucleus_base.linear_operators.delayedConstructionOperator attribute) (PyNucleus_base.linear_operators.Multiply_Linear_Operator attribute) (PyNucleus_base.linear_operators.Product_Linear_Operator attribute) (PyNucleus_base.linear_operators.Transpose_Linear_Operator attribute) (PyNucleus_base.linear_operators.Triple_Product_Linear_Operator attribute) (PyNucleus_base.solvers.solver attribute) (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) (PyNucleus_multilevelSolver.smoothers.ComplexgmresSmoother attribute) (PyNucleus_multilevelSolver.smoothers.ComplexseparableSmoother attribute) (PyNucleus_multilevelSolver.smoothers.Complexsmoother attribute) (PyNucleus_multilevelSolver.smoothers.gmresSmoother attribute) (PyNucleus_multilevelSolver.smoothers.separableSmoother attribute) (PyNucleus_multilevelSolver.smoothers.smoother attribute) (PyNucleus_multilevelSolver.smoothers.sorPreconditioner attribute) a (PyNucleus_nl.interactionDomains.ellipse_barycenter attribute) (PyNucleus_nl.interactionDomains.ellipse_retriangulation attribute) A (PyNucleus_nl.interactionDomains.linearTransformInteraction attribute) A1 (PyNucleus_base.linear_operators.split_CSR_LinearOperator attribute) A2 (PyNucleus_base.linear_operators.split_CSR_LinearOperator attribute) accumulate() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) accumulate2global() (in module PyNucleus_fem.mesh) accumulate_py() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) accumulate_serial() (in module PyNucleus_base.linalg) accumulateComplex() (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) accumulateOperator (PyNucleus_multilevelSolver.levels.algebraicLevelBase property) add() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) (PyNucleus_base.utilsFem.driverArgGroup method) (PyNucleus_base.utilsFem.outputGroup method) (PyNucleus_base.utilsFem.statisticOutputGroup method) (PyNucleus_fem.mesh.plotManager method) add_python() (PyNucleus_base.sparsityPattern.sparsityPattern method) addCells() (PyNucleus_fem.meshOverlaps.vertexMapManager method) addFrame() (PyNucleus_base.plot_utils.movieCreator method) addGroup() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) (PyNucleus_base.utilsFem.seriesOutputGroup method) addOutputGroup() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) addOutputSeries() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) addParametrizedArg() (PyNucleus_base.utilsFem.driverAddon method) addPositional() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) addProperties() (PyNucleus_base.utilsFem.classWithComputedDependencies method) addProperty() (PyNucleus_base.utilsFem.classWithComputedDependencies method) addQuadRule_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) addRemote() (PyNucleus_base.utilsFem.classWithComputedDependencies method) addRemoteGeneratedProperty() (PyNucleus_base.utilsFem.classWithComputedDependencies method) addRemoteRequiredProperties() (PyNucleus_base.utilsFem.classWithComputedDependencies method) addRemoteRequiredProperty() (PyNucleus_base.utilsFem.classWithComputedDependencies method) addSharedCells() (PyNucleus_fem.meshOverlaps.vertexMapManager method) addStatsOutputGroup() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) addToEntry_py() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) addToProcessHook() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) addValue() (PyNucleus_base.performanceLogger.FakePLogger method) (PyNucleus_base.performanceLogger.PLogger method) addVertex() (PyNucleus_fem.meshOverlaps.vertexMapManager method) addVertexShared() (PyNucleus_fem.meshOverlaps.vertexMapManager method) admissibleOrders (PyNucleus_nl.kernelsCy.RangedFractionalKernel attribute) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel attribute) affineFunction (class in PyNucleus_fem.functions) Ainv (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute)

algebraicLevel (class in PyNucleus_multilevelSolver.levels) algebraicLevelBase (class in PyNucleus_multilevelSolver.levels) algebraicOverlap (class in PyNucleus_fem.algebraicOverlaps) algebraicOverlapBlocking (class in PyNucleus_fem.algebraicOverlaps) algebraicOverlapManager (class in PyNucleus_fem.algebraicOverlaps) algebraicOverlapOneSidedGet (class in PyNucleus_fem.algebraicOverlaps) algebraicOverlapOneSidedPut (class in PyNucleus_fem.algebraicOverlaps) algebraicOverlapOneSidedPutLockAll (class in PyNucleus_fem.algebraicOverlaps) algebraicOverlapPersistent (class in PyNucleus_fem.algebraicOverlaps) allProperties (PyNucleus_base.utilsFem.classWithComputedDependencies property) allreduce() (PyNucleus_base.utilsCy.FakeComm_class method) Anear (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) angular_shift (PyNucleus_fem.functions.rhsFractional2D attribute) (PyNucleus_fem.functions.solFractional2D attribute) apply() (PyNucleus_nl.clusterMethodCy.farFieldClusterPair method) applyPeriodicity() (PyNucleus_fem.DoFMaps.DoFMap method) applyTrans() (PyNucleus_nl.clusterMethodCy.farFieldClusterPair method) applyVec() (PyNucleus_nl.clusterMethodCy.farFieldClusterPair method) applyVecTrans() (PyNucleus_nl.clusterMethodCy.farFieldClusterPair method) argInterpreter() (PyNucleus_base.utilsFem.driverAddon method) arnoldi() (in module PyNucleus_base.linalg) arrayIndexSet (class in PyNucleus_base.tupleDict) arrayIndexSetIterator (class in PyNucleus_base.tupleDict) asPreconditioner() (PyNucleus_base.linalg.ILU_solver method) (PyNucleus_base.solvers.complex_solver method) (PyNucleus_base.solvers.solver method) (PyNucleus_multilevelSolver.multigrid.Complexmultigrid method) (PyNucleus_multilevelSolver.multigrid.multigrid method) assembleCurlCurl() (in module PyNucleus_fem.femCy) assembleDiscreteCurl() (in module PyNucleus_fem.femCy) assembleDiscreteGradient() (in module PyNucleus_fem.femCy) assembleDrift() (in module PyNucleus_fem.femCy) (PyNucleus_fem.DoFMaps.DoFMap method) assembleElasticity() (PyNucleus_fem.DoFMaps.DoFMap method) assembleFarFieldInteractions() (in module PyNucleus_nl.clusterMethodCy) assembleJumpMatrix() (in module PyNucleus_fem.femCy) assembleMass() (in module PyNucleus_fem.femCy) (PyNucleus_fem.DoFMaps.DoFMap method) assembleMassNonSym() (in module PyNucleus_fem.femCy) assembleMatrix() (in module PyNucleus_fem.femCy) assembleNonlinearity() (in module PyNucleus_fem.femCy) (PyNucleus_fem.DoFMaps.DoFMap method) assembleNonlocal() (PyNucleus_fem.DoFMaps.DoFMap method) assembleNonSymMatrix_CSR() (in module PyNucleus_fem.femCy) assembleRHS() (in module PyNucleus_fem.femCy) (PyNucleus_fem.DoFMaps.DoFMap method) assembleRHScomplex() (in module PyNucleus_fem.femCy) assembleRHSfromFEfunction() (in module PyNucleus_fem.femCy) assembleRHSgrad() (in module PyNucleus_fem.femCy) (PyNucleus_fem.DoFMaps.DoFMap method) assembleStiffness() (in module PyNucleus_fem.femCy) (PyNucleus_fem.DoFMaps.DoFMap method) assembleSurfaceMass() (in module PyNucleus_fem.femCy) assign() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) assure_constructed() (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.interpolationOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) astype() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) asynchronous (PyNucleus_fem.distributed_operators.ComplexDistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.DistributedLinearOperator attribute) (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute) atExitHandler() (PyNucleus_base.utilsFem.exitHandler method) augmentWithBoundaryData() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.DoFMaps.fe_vector method) augmentWithZero() (PyNucleus_fem.DoFMaps.DoFMap method)

B

B (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator attribute) (PyNucleus_base.linear_operators.Product_Linear_Operator attribute) (PyNucleus_base.linear_operators.Triple_Product_Linear_Operator attribute) b (PyNucleus_nl.interactionDomains.ellipse_barycenter attribute) (PyNucleus_nl.interactionDomains.ellipse_retriangulation attribute) balancePartitions() (PyNucleus_fem.meshPartitioning.regularVertexPartitioner method) ball() (in module PyNucleus_fem.mesh) ball1_barycenter (class in PyNucleus_nl.interactionDomains) ball1_retriangulation (class in PyNucleus_nl.interactionDomains) ball2() (in module PyNucleus_fem.mesh) ball2_barycenter (class in PyNucleus_nl.interactionDomains) ball2_dilation_barycenter (class in PyNucleus_nl.interactionDomains) ball2_dilation_retriangulation (class in PyNucleus_nl.interactionDomains) ball2_retriangulation (class in PyNucleus_nl.interactionDomains) ball2Complement (class in PyNucleus_nl.interactionDomains) ballInf_barycenter (class in PyNucleus_nl.interactionDomains) ballInf_retriangulation (class in PyNucleus_nl.interactionDomains) ballNd() (in module PyNucleus_fem.mesh) ballWithInteractions() (in module PyNucleus_nl.nonlocalProblems) Barrier() (PyNucleus_base.utilsCy.FakeComm_class method) bary (PyNucleus_fem.meshCy.cellFinder attribute) barycenterDomain (class in PyNucleus_nl.interactionDomains) basis (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) beamerContext() (in module PyNucleus_base.plot_utils) bicgstab() (in module PyNucleus_base.linalg) bicgstab_solver (class in PyNucleus_base.solvers) bicgstabComplex() (in module PyNucleus_base.linalg) bitArray (class in PyNucleus_base.tupleDict) bitArrayIterator (class in PyNucleus_base.tupleDict) blockDiagonalOperator (class in PyNucleus_base.linear_operators) blockIndicator (PyNucleus_nl.fractionalOrders.piecewiseConstantFractionalOrder attribute) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel attribute) blockJacobiPreconditioner (class in PyNucleus_multilevelSolver.smoothers) blockJacobiSmoother (class in PyNucleus_multilevelSolver.smoothers) blockLowerInverse (class in PyNucleus_base.linear_operators) blockOperator (class in PyNucleus_base.linear_operators) blockUpperInverse (class in PyNucleus_base.linear_operators) boundary (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) boundary1D() (in module PyNucleus_fem.meshOverlaps) boundary2D() (in module PyNucleus_fem.meshOverlaps)

boundary3D() (in module PyNucleus_fem.meshOverlaps) boundaryCells (PyNucleus_fem.mesh.meshNd property) boundaryEdges (PyNucleus_fem.mesh.meshNd property) boundaryEdges() (in module PyNucleus_fem.meshCy) boundaryEdgesFromBoundaryFaces() (in module PyNucleus_fem.meshCy) boundaryEdgeTags (PyNucleus_fem.mesh.meshNd property) boundaryFaces (PyNucleus_fem.mesh.meshNd property) boundaryFaces() (in module PyNucleus_fem.meshCy) boundaryFacesWithOrientation() (in module PyNucleus_fem.meshCy) boundaryFaceTags (PyNucleus_fem.mesh.meshNd property) boundaryLayer (class in PyNucleus_fem.boundaryLayerCy) boundaryVertexTags (PyNucleus_fem.mesh.meshNd property) boundaryVertices (PyNucleus_fem.mesh.meshNd property) boundaryVertices() (in module PyNucleus_fem.meshCy) boundaryVerticesFromBoundaryEdges() (in module PyNucleus_fem.meshCy) box (PyNucleus_nl.clusterMethodCy.tree_node attribute) box() (in module PyNucleus_fem.mesh) boxes (PyNucleus_nl.clusterMethodCy.tree_node attribute) boxIndicators() (in module PyNucleus_nl.nonlocalProblems) boxWithBallCutout() (in module PyNucleus_fem.mesh) boxWithInteractions() (in module PyNucleus_fem.mesh) brusselator (class in PyNucleus_fem.femCy) brusselatorProblem (class in PyNucleus_nl.nonlocalProblems) build() (PyNucleus_base.factory.factory method) (PyNucleus_base.solver_factory.solverFactory method) (PyNucleus_fem.mesh.meshFactory method) (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) (PyNucleus_multilevelSolver.connectors.repartitionConnector method) (PyNucleus_multilevelSolver.hierarchies.hierarchy method) (PyNucleus_multilevelSolver.levels.algebraicLevel method) (PyNucleus_multilevelSolver.levels.algebraicLevelBase method) (PyNucleus_nl.nonlocalProblems.fractionalOrderFactoryClass method) (PyNucleus_nl.nonlocalProblems.nonlocalMeshFactoryClass method) buildCoarserMatrices() (PyNucleus_multilevelSolver.levels.algebraicLevel method) (PyNucleus_multilevelSolver.levels.algebraicLevelBase method) buildCollapsedRestrictionProlongation() (PyNucleus_multilevelSolver.hierarchies.hierarchy method) buildHierarchies() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) buildMesh() (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalPoissonProblem method) buildNonSymmetricSparsityPattern() (PyNucleus_fem.DoFMaps.DoFMap method) buildRestrictionProlongation() (in module PyNucleus_multilevelSolver.restrictionProlongation) buildSparsityPattern() (PyNucleus_fem.DoFMaps.DoFMap method)

C

C (PyNucleus_base.linear_operators.Triple_Product_Linear_Operator attribute) c (PyNucleus_fem.functions.affineFunction attribute) (PyNucleus_fem.functions.sqrtAffineFunction attribute) CahnHilliard_F (class in PyNucleus_fem.femCy) CahnHilliard_F_prime (class in PyNucleus_fem.femCy) canBeAssembled (PyNucleus_nl.clusterMethodCy.tree_node attribute) canUseAsynchronousReduce (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager attribute) canWriteRHS() (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver method) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver method) cell2dof_py() (PyNucleus_fem.DoFMaps.DoFMap method) cellFinder (class in PyNucleus_fem.meshCy) (PyNucleus_fem.DoFMaps.elementSizeFunction attribute) (PyNucleus_nl.fractionalOrders.lookupExtended attribute) cellFinder2 (class in PyNucleus_fem.meshCy) cellNo1 (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) cellNo2 (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) cells (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_fem.meshOverlaps.sharedMesh attribute) (PyNucleus_nl.clusterMethodCy.tree_node attribute) cells_as_array (PyNucleus_fem.meshCy.meshBase attribute) cg() (in module PyNucleus_base.linalg) cg_solver (class in PyNucleus_base.solvers) changeLogLevel() (PyNucleus_base.utilsFem.classWithComputedDependencies method) chebyshevPreconditioner (class in PyNucleus_multilevelSolver.smoothers) chebyshevSmoother (class in PyNucleus_multilevelSolver.smoothers) check() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) (PyNucleus_fem.meshOverlaps.overlapManager method) checkDoFMap() (PyNucleus_fem.mesh.mesh3d method) checkNearFarFields() (in module PyNucleus_nl.clusterMethodCy) children (PyNucleus_nl.clusterMethodCy.tree_node attribute) chol_solver (class in PyNucleus_base.solvers) circle (class in PyNucleus_fem.meshConstruction) circle() (in module PyNucleus_fem.mesh) circleWithInnerRadius() (in module PyNucleus_fem.mesh) circularSegment (class in PyNucleus_fem.meshConstruction) classWithComputedDependencies (class in PyNucleus_base.utilsFem) clean() (PyNucleus_multilevelSolver.levels.algebraicLevelBase method) (PyNucleus_multilevelSolver.levels.meshLevel method) cleanup() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) close() (PyNucleus_base.utilsFem.MPIFileHandler method) cluster_size (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) coarse_solver (PyNucleus_multilevelSolver.multigrid.Complexmultigrid attribute) (PyNucleus_multilevelSolver.multigrid.multigrid attribute) coarseSolver (class in PyNucleus_multilevelSolver.coarseSolvers) coefficientsDown (PyNucleus_nl.clusterMethodCy.tree_node attribute) coefficientsDownVec (PyNucleus_nl.clusterMethodCy.tree_node attribute) coefficientsUp (PyNucleus_nl.clusterMethodCy.tree_node attribute) coefficientsUpOffset (PyNucleus_nl.clusterMethodCy.tree_node attribute) coeffs (PyNucleus_base.linear_operators.sumMultiplyOperator attribute) (PyNucleus_multilevelSolver.smoothers.chebyshevPreconditioner attribute) collectInformation() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) columns() (in module PyNucleus_base.utilsFem) combine() (PyNucleus_fem.DoFMaps.DoFMap method) combinedOperator (class in PyNucleus_base.sparseGraph) comm (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager attribute) (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator attribute) (PyNucleus_fem.distributed_operators.RowDistributedOperator attribute) (PyNucleus_fem.meshOverlaps.sharedMeshManager attribute) (PyNucleus_multilevelSolver.multigrid.Complexmultigrid attribute) (PyNucleus_multilevelSolver.multigrid.multigrid attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) comm1RankSubdomainNo() (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) comm1SubdomainGlobalRank() (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) comm2RankSubdomainNo() (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) comm2SubdomainGlobalRank() (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) complement (PyNucleus_nl.interactionDomains.interactionDomain attribute) (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) COMPLEX (in module PyNucleus_base) complex_fe_vector (class in PyNucleus_fem.DoFMaps) complex_gmres_solver (class in PyNucleus_base.solvers) complex_inner (PyNucleus_fem.DoFMaps.DoFMap attribute) complex_iterative_solver (class in PyNucleus_base.solvers) complex_krylov_solver (class in PyNucleus_base.solvers) complex_lu_solver (class in PyNucleus_base.solvers) complex_multi_fe_vector (class in PyNucleus_fem.DoFMaps) complex_norm (PyNucleus_fem.DoFMaps.DoFMap attribute) complex_preconditioner (class in PyNucleus_base.solvers) complex_solver (class in PyNucleus_base.solvers) ComplexblockJacobiPreconditioner (class in PyNucleus_multilevelSolver.smoothers) ComplexblockJacobiSmoother (class in PyNucleus_multilevelSolver.smoothers) ComplexcoarseSolver (class in PyNucleus_multilevelSolver.coarseSolvers) ComplexconstantTwoPoint (class in PyNucleus_nl.twoPointFunctions) ComplexCSR_DistributedLinearOperator (class in PyNucleus_fem.distributed_operators) ComplexCSR_LinearOperator (class in PyNucleus_base.linear_operators) ComplexCSR_VectorLinearOperator (class in PyNucleus_base.linear_operators) ComplexDense_LinearOperator (class in PyNucleus_base.linear_operators) ComplexDense_SubBlock_LinearOperator (class in PyNucleus_base.linear_operators) ComplexDense_VectorLinearOperator (class in PyNucleus_base.linear_operators) ComplexdiagonalOperator (class in PyNucleus_base.linear_operators) ComplexDistributedLinearOperator (class in PyNucleus_fem.distributed_operators) Complexdouble_local_matrix_t (class in PyNucleus_nl.nonlocalOperator) ComplexfixedTwoPointFunction (class in PyNucleus_nl.twoPointFunctions) complexFunction (class in PyNucleus_fem.functions) ComplexgmresSmoother (class in PyNucleus_multilevelSolver.smoothers) ComplexIJOperator (class in PyNucleus_base.linear_operators)

ComplexinvDiagonal (class in PyNucleus_base.linear_operators) complexipBase (class in PyNucleus_base.ip_norm) ComplexjacobiPreconditioner (class in PyNucleus_multilevelSolver.smoothers) ComplexjacobiSmoother (class in PyNucleus_multilevelSolver.smoothers) ComplexKernel (class in PyNucleus_nl.kernelsCy) complexLambda (class in PyNucleus_fem.functions) ComplexlevelMemory (class in PyNucleus_multilevelSolver.multigrid) ComplexLinearOperator (class in PyNucleus_base.linear_operators) ComplexLinearOperator_wrapper (class in PyNucleus_base.linear_operators) ComplexlookupTwoPoint (class in PyNucleus_nl.twoPointFunctions) complexMulFunction (class in PyNucleus_fem.functions) Complexmultigrid (class in PyNucleus_multilevelSolver.multigrid) ComplexmultigridPreconditioner (class in PyNucleus_multilevelSolver.multigrid) ComplexMultiply_Linear_Operator (class in PyNucleus_base.linear_operators) ComplexnonlocalOperator (class in PyNucleus_nl.nonlocalOperator) complexNormBase (class in PyNucleus_base.ip_norm) ComplexparametrizedTwoPointFunction (class in PyNucleus_nl.twoPointFunctions) Complexpreconditioner (class in PyNucleus_multilevelSolver.smoothers) ComplexProduct_Linear_Operator (class in PyNucleus_base.linear_operators) ComplexproductParametrizedTwoPoint (class in PyNucleus_nl.twoPointFunctions) ComplexproductTwoPoint (class in PyNucleus_nl.twoPointFunctions) ComplexRowDistributedOperator (class in PyNucleus_fem.distributed_operators) ComplexseparableSmoother (class in PyNucleus_multilevelSolver.smoothers) Complexsmoother (class in PyNucleus_multilevelSolver.smoothers) ComplexSSS_LinearOperator (class in PyNucleus_base.linear_operators) ComplexSSS_VectorLinearOperator (class in PyNucleus_base.linear_operators) complexSumFunction (class in PyNucleus_fem.functions) ComplexTimeStepperLinearOperator (class in PyNucleus_base.linear_operators) ComplexTranspose_Linear_Operator (class in PyNucleus_base.linear_operators) ComplextwoPointFunction (class in PyNucleus_nl.twoPointFunctions) ComplexVectorLinearOperator (class in PyNucleus_base.linear_operators) components (PyNucleus_fem.functions.componentVectorFunction attribute) componentVectorFunction (class in PyNucleus_fem.functions) compressionRatio (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) computeCellPairIdentifier_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) computeErrors() (in module PyNucleus_base.utilsFem) constant (class in PyNucleus_fem.functions) constantExtended (class in PyNucleus_nl.fractionalOrders) constantFractionalLaplacianScaling (class in PyNucleus_nl.kernelNormalization) constantFractionalLaplacianScalingBoundary (class in PyNucleus_nl.kernelNormalization) constantFractionalLaplacianScalingDerivative (class in PyNucleus_nl.kernelNormalization) constantIntegrableScaling (class in PyNucleus_nl.kernelNormalization) constantMatrixFunction (class in PyNucleus_fem.functions) constantNonSymFractionalOrder (class in PyNucleus_nl.fractionalOrders) constantTwoPoint (class in PyNucleus_nl.twoPointFunctions) constFractionalOrder (class in PyNucleus_nl.fractionalOrders) construct() (PyNucleus_base.linear_operators.delayedConstructionOperator method) constructAuxiliarySpace() (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalBaseProblem method) constructBasis() (PyNucleus_nl.clusterMethodCy.H2Matrix method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix method) constructBasisMatrix() (PyNucleus_nl.clusterMethodCy.tree_node method) convClient (PyNucleus_base.solvers.complex_krylov_solver attribute) (PyNucleus_base.solvers.krylov_solver attribute) convergenceClient (class in PyNucleus_base.convergence) convergenceCriterion (class in PyNucleus_base.convergence) convergenceMaster (class in PyNucleus_base.convergence) conversionInterpreter() (PyNucleus_base.utilsFem.driverAddon method) convert() (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData method) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator method) convMaster (PyNucleus_base.solvers.complex_krylov_solver attribute) (PyNucleus_base.solvers.krylov_solver attribute) coordinate (class in PyNucleus_fem.functions) coords (PyNucleus_nl.clusterMethodCy.tree_node attribute) copy() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator method) (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) (PyNucleus_fem.mesh.meshNd method) (PyNucleus_fem.meshCy.meshBase method) (PyNucleus_fem.meshOverlaps.interfaceManager method) (PyNucleus_fem.meshOverlaps.overlapManager method) (PyNucleus_fem.meshOverlaps.sharedMeshManager method) (PyNucleus_multilevelSolver.levels.meshLevel method) countDoFs() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) create2Py() (PyNucleus_base.intTuple.intTuple static method) create3Py() (PyNucleus_base.intTuple.intTuple static method) createPy() (PyNucleus_base.intTuple.intTuple static method) createSubdomains() (PyNucleus_fem.splitting.meshSplitter2 method) crossSquare() (in module PyNucleus_fem.mesh) CSR_DistributedLinearOperator (class in PyNucleus_fem.distributed_operators) CSR_LinearOperator (class in PyNucleus_base.linear_operators) CSR_VectorLinearOperator (class in PyNucleus_base.linear_operators) ctxAttrs (PyNucleus_base.solvers.complex_preconditioner attribute) (PyNucleus_base.solvers.preconditioner attribute) curlcurl_2d_sym (class in PyNucleus_fem.femCy) curlcurl_2d_sym_N1e (class in PyNucleus_fem.femCy) cuthill_mckee() (in module PyNucleus_base.sparseGraph) cutoutCircle() (in module PyNucleus_fem.mesh) cycle (PyNucleus_multilevelSolver.multigrid.Complexmultigrid attribute) (PyNucleus_multilevelSolver.multigrid.multigrid attribute) CycleType (class in PyNucleus_multilevelSolver.multigrid)

D

D (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) (PyNucleus_multilevelSolver.smoothers.gaussSeidelSmoother attribute) (PyNucleus_multilevelSolver.smoothers.sorPreconditioner attribute) data (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexDense_SubBlock_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexdiagonalOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.CSR_LinearOperator attribute) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.Dense_LinearOperator attribute) (PyNucleus_base.linear_operators.Dense_SubBlock_LinearOperator attribute) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.diagonalOperator attribute) (PyNucleus_base.linear_operators.SSS_LinearOperator attribute) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator attribute) (PyNucleus_base.solvers.ichol_solver attribute) debugOperator (class in PyNucleus_base.linear_operators) declareFigure() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) declareGeneratedProperties() (PyNucleus_base.utilsFem.propertyBuilder method) declareGeneratedProperty() (PyNucleus_base.utilsFem.propertyBuilder method) decode_edge_python() (in module PyNucleus_fem.meshCy) delayedConstructionOperator (class in PyNucleus_base.linear_operators) delta (PyNucleus_fem.meshCy.meshBase attribute) Dense_LinearOperator (class in PyNucleus_base.linear_operators) Dense_SubBlock_LinearOperator (class in PyNucleus_base.linear_operators) Dense_VectorLinearOperator (class in PyNucleus_base.linear_operators) derivative (PyNucleus_base.linear_operators.interpolationOperator attribute) (PyNucleus_nl.kernelsCy.FractionalKernel attribute) diagonal (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator property) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexdiagonalOperator property) (PyNucleus_base.linear_operators.ComplexLinearOperator property) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator property) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator property) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator property) (PyNucleus_base.linear_operators.CSR_LinearOperator property) (PyNucleus_base.linear_operators.delayedConstructionOperator property) (PyNucleus_base.linear_operators.Dense_LinearOperator attribute) (PyNucleus_base.linear_operators.diagonalOperator property) (PyNucleus_base.linear_operators.HelmholtzShiftOperator property) (PyNucleus_base.linear_operators.identityOperator property) (PyNucleus_base.linear_operators.LinearOperator property) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator property) (PyNucleus_base.linear_operators.Multiply_Linear_Operator property) (PyNucleus_base.linear_operators.nullOperator property) (PyNucleus_base.linear_operators.SSS_LinearOperator attribute) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.sumMultiplyOperator property) (PyNucleus_base.linear_operators.TimeStepperLinearOperator property) (PyNucleus_base.linear_operators.Transpose_Linear_Operator property) (PyNucleus_base.solvers.ichol_solver attribute) (PyNucleus_fem.distributed_operators.ComplexCSR_DistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.ComplexDistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator attribute) (PyNucleus_fem.distributed_operators.CSR_DistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.DistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.RowDistributedOperator attribute) (PyNucleus_fem.femCy.matrixFreeOperator property) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_globalData attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) diagonal() (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction method) (PyNucleus_nl.twoPointFunctions.twoPointFunction method) diagonalOperator (class in PyNucleus_base.linear_operators) diam (PyNucleus_fem.mesh.meshNd property) Didx (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) DidxNonOverlapping (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) diff() (PyNucleus_base.utilsFem.outputGroup method) (PyNucleus_base.utilsFem.seriesOutputGroup method) diffDict() (in module PyNucleus_base.utilsFem) diffMemory (PyNucleus_base.performanceLogger.Timer property) diffusionProblem (class in PyNucleus_fem) (class in PyNucleus_fem.pdeProblems) diffusivity (PyNucleus_fem.femCy.stiffness_2d_sym_anisotropic3_P1 attribute) dim (PyNucleus_fem.DoFMaps.DoFMap attribute) (PyNucleus_fem.DoFMaps.shapeFunction attribute) (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_fem.meshOverlaps.sharedMesh attribute) (PyNucleus_fem.meshOverlaps.vertexMap attribute) (PyNucleus_fem.quadrature.quadratureRule attribute) (PyNucleus_nl.clusterMethodCy.tree_node attribute) (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) (PyNucleus_nl.twoPointFunctions.temperedTwoPoint attribute)

directlyGetWithoutChecks() (PyNucleus_base.utilsFem.classWithComputedDependencies method) directlySetWithoutChecks() (PyNucleus_base.utilsFem.classWithComputedDependencies method) disconnectedDomain() (in module PyNucleus_fem.mesh) disconnectedInterval() (in module PyNucleus_fem.mesh) discrete_curl_2d_P0_N1e (class in PyNucleus_fem.femCy) discrete_gradient_2d_N1e_P1 (class in PyNucleus_fem.femCy) discWithInteraction() (in module PyNucleus_fem.mesh) discWithIslands() (in module PyNucleus_fem.mesh) display() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) display_available (PyNucleus_base.driver property) (PyNucleus_base.utilsFem.driver property) dist (PyNucleus_nl.interactionDomains.interactionDomain attribute) dist2 (PyNucleus_nl.interactionDomains.interactionDomain attribute) distantQuadRules (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) distFromRoot (PyNucleus_nl.clusterMethodCy.tree_node attribute) distribute() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) distribute_py() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) distributeComplex() (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) DistributedH2Matrix_globalData (class in PyNucleus_nl.clusterMethodCy) DistributedH2Matrix_localData (class in PyNucleus_nl.clusterMethodCy) DistributedLinearOperator (class in PyNucleus_fem.distributed_operators) (class in PyNucleus_nl.clusterMethodCy) div_div_2d (class in PyNucleus_fem.femCy) dm (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator attribute) (PyNucleus_fem.distributed_operators.RowDistributedOperator attribute) (PyNucleus_fem.DoFMaps.complex_fe_vector attribute) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector attribute) (PyNucleus_fem.DoFMaps.fe_vector attribute) (PyNucleus_fem.DoFMaps.multi_fe_vector attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) (PyNucleus_nl.fractionalOrders.lookupExtended attribute) (PyNucleus_nl.twoPointFunctions.ComplexlookupTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.lookupTwoPoint attribute) doDistribute (PyNucleus_fem.distributed_operators.ComplexDistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.DistributedLinearOperator attribute) dof_dual (PyNucleus_fem.DoFMaps.DoFMap attribute) dofChecker (class in PyNucleus_fem.meshOverlaps) dofCheckerArray (class in PyNucleus_fem.meshOverlaps) dofCheckerSet (class in PyNucleus_fem.meshOverlaps) DoFMap (class in PyNucleus_fem.DoFMaps) (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) DoFMap2str() (in module PyNucleus_fem.DoFMaps) dofmapSplitter (class in PyNucleus_fem.splitting) dofPartitioner (class in PyNucleus_fem.meshPartitioning) dofs (PyNucleus_fem.DoFMaps.DoFMap attribute) (PyNucleus_nl.clusterMethodCy.tree_node attribute) dofs_per_cell (PyNucleus_fem.DoFMaps.DoFMap attribute) dofs_per_edge (PyNucleus_fem.DoFMaps.DoFMap attribute) dofs_per_element (PyNucleus_fem.DoFMaps.DoFMap attribute) dofs_per_face (PyNucleus_fem.DoFMaps.DoFMap attribute) dofs_per_vertex (PyNucleus_fem.DoFMaps.DoFMap attribute) dot() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) dotMV() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) double_graded_circle() (in module PyNucleus_fem.mesh) double_graded_interval() (in module PyNucleus_fem.mesh) double_graded_interval_with_interaction() (in module PyNucleus_fem.mesh) double_local_matrix_t (class in PyNucleus_nl.nonlocalOperator) doubleIntervalWithInteractions() (in module PyNucleus_fem.mesh) doubleSimplexQuadratureRule (class in PyNucleus_fem.quadrature) doubleSquareWithInteractions() (in module PyNucleus_fem.mesh) doubleSquareWithInteractionsCorners() (in module PyNucleus_fem.mesh) downwardPass_py() (PyNucleus_nl.clusterMethodCy.tree_node method) drift_1d (class in PyNucleus_fem.femCy) drift_1d_P1 (class in PyNucleus_fem.femCy) drift_2d (class in PyNucleus_fem.femCy) drift_2d_P1 (class in PyNucleus_fem.femCy) driver (class in PyNucleus_base) (class in PyNucleus_base.utilsFem) driverAddon (class in PyNucleus_base.utilsFem) driverArgGroup (class in PyNucleus_base.utilsFem) dropColsInPlace() (in module PyNucleus_base.sparseGraph) dropRowsInPlace() (in module PyNucleus_base.sparseGraph) dtype (PyNucleus_fem.DoFMaps.complex_fe_vector attribute) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector attribute) (PyNucleus_fem.DoFMaps.fe_vector attribute) (PyNucleus_fem.DoFMaps.multi_fe_vector attribute) dumbbell() (in module PyNucleus_fem.mesh) Dval (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) DvalNonOverlapping (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute)

E

edges (PyNucleus_fem.meshOverlaps.sharedMesh attribute) eigfun_disc (class in PyNucleus_fem.functions) eigfun_disc_deriv_x (class in PyNucleus_fem.functions) eigfun_disc_deriv_y (class in PyNucleus_fem.functions) elasticity_1d_P1 (class in PyNucleus_fem.femCy) elasticity_2d_P1 (class in PyNucleus_fem.femCy) elasticity_3d_P1 (class in PyNucleus_fem.femCy) elementSizeFunction (class in PyNucleus_fem.DoFMaps) eliminate_zeros() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) ellipse_barycenter (class in PyNucleus_nl.interactionDomains) ellipse_retriangulation (class in PyNucleus_nl.interactionDomains) ellipseTransform (class in PyNucleus_nl.interactionDomains) emit() (PyNucleus_base.utilsFem.MPIFileHandler method) empty() (PyNucleus_base.linear_operators.ComplexDense_LinearOperator static method) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator static method) (PyNucleus_base.linear_operators.Dense_LinearOperator static method) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator static method) (PyNucleus_base.performanceLogger.FakePLogger method) (PyNucleus_base.performanceLogger.PLogger method) (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.bitArray method) (PyNucleus_base.tupleDict.indexSet method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method) (PyNucleus_fem.DoFMaps.DoFMap method) EmptyHierarchy (class in PyNucleus_multilevelSolver.hierarchies) encode_edge_python() (in module PyNucleus_fem.meshCy) encode_face_python() (in module PyNucleus_fem.meshCy) endMem (PyNucleus_base.performanceLogger.Timer attribute) endMemRegion() (in module PyNucleus_base.performanceLogger) enterData() (PyNucleus_base.performanceLogger.FakeTimer method) (PyNucleus_base.performanceLogger.Timer method) enterLeafValues() (PyNucleus_nl.clusterMethodCy.tree_node method) enterLeafValuesGrad() (PyNucleus_nl.clusterMethodCy.tree_node method) enterValue_py() (PyNucleus_base.tupleDict.tupleDictINDEX method) errorBound (PyNucleus_nl.kernelsCy.RangedFractionalKernel attribute) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel attribute)

estimateSpectralRadius() (in module PyNucleus_base.linalg) eval_py() (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.Kernel method) (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) evalComplexFun() (PyNucleus_fem.quadrature.simplexQuadratureRule method) evalFun() (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.quadrature.doubleSimplexQuadratureRule method) (PyNucleus_fem.quadrature.quadQuadratureRule method) (PyNucleus_fem.quadrature.simplexQuadratureRule method) evalGlobalPy() (PyNucleus_fem.DoFMaps.shapeFunction method) evalGrad_py() (PyNucleus_nl.fractionalOrders.fractionalOrderBase method) evalGradPy() (PyNucleus_fem.DoFMaps.shapeFunction method) evalParams_py() (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.FractionalKernel method) (PyNucleus_nl.kernelsCy.Kernel method) evalSimplexVolumeGradientsInnerProducts_py() (PyNucleus_fem.femCy.simplexComputations method) evalVectorFun() (PyNucleus_fem.quadrature.simplexQuadratureRule method) evalVolume_py() (PyNucleus_fem.femCy.simplexComputations method) evalVolumeGradients_py() (PyNucleus_fem.femCy.simplexComputations method) evalVolumeGradientsInnerProducts_py() (PyNucleus_fem.femCy.simplexComputations method) exactSphericalIntegral2D (class in PyNucleus_nl.clusterMethodCy) exc_handler() (PyNucleus_base.utilsFem.exitHandler method) exchangeIn (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) exchangeMemOffsets() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedGet method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPut method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPutLockAll method) exchangeOut (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) exchangePartitioning() (PyNucleus_fem.meshOverlaps.sharedMeshManager method) exit() (PyNucleus_base.utilsFem.exitHandler method) exitHandler (class in PyNucleus_base.utilsFem) expDiffusivity (class in PyNucleus_fem.functions) exportSolutionVTK() (PyNucleus_fem.mesh.meshNd method) exportVTK() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.mesh.meshNd method) extendedFunction (class in PyNucleus_nl.fractionalOrders) extendOverlap() (in module PyNucleus_fem.meshOverlaps)

F

f (PyNucleus_fem.functions.complexMulFunction attribute) (PyNucleus_fem.functions.mulFunction attribute) (PyNucleus_fem.functions.mulVectorFunction attribute) f1 (PyNucleus_fem.functions.complexSumFunction attribute) (PyNucleus_fem.functions.prodFunction attribute) (PyNucleus_fem.functions.sumFunction attribute) (PyNucleus_fem.functions.sumVectorFunction attribute) (PyNucleus_nl.twoPointFunctions.ComplexproductParametrizedTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.ComplexproductTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.productParametrizedTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.productTwoPoint attribute) f2 (PyNucleus_fem.functions.complexSumFunction attribute) (PyNucleus_fem.functions.prodFunction attribute) (PyNucleus_fem.functions.sumFunction attribute) (PyNucleus_fem.functions.sumVectorFunction attribute) (PyNucleus_nl.twoPointFunctions.ComplexproductParametrizedTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.ComplexproductTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.productParametrizedTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.productTwoPoint attribute) fac (PyNucleus_fem.functions.complexMulFunction attribute) (PyNucleus_fem.functions.mulFunction attribute) (PyNucleus_fem.functions.mulVectorFunction attribute) (PyNucleus_nl.twoPointFunctions.smoothedLeftRightTwoPoint attribute) fac1 (PyNucleus_fem.functions.complexSumFunction attribute) (PyNucleus_fem.functions.sumFunction attribute) (PyNucleus_fem.functions.sumVectorFunction attribute) fac2 (PyNucleus_fem.functions.complexSumFunction attribute) (PyNucleus_fem.functions.sumFunction attribute) (PyNucleus_fem.functions.sumVectorFunction attribute) faces (PyNucleus_fem.meshOverlaps.sharedMesh attribute) faceVals (class in PyNucleus_fem.meshCy) facM (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator attribute) (PyNucleus_base.linear_operators.TimeStepperLinearOperator attribute) facS (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator attribute) (PyNucleus_base.linear_operators.TimeStepperLinearOperator attribute) factor (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator attribute) (PyNucleus_base.linear_operators.Multiply_Linear_Operator attribute) factory (class in PyNucleus_base.factory) FakeComm() (in module PyNucleus_base.utilsCy) FakeComm_class (class in PyNucleus_base.utilsCy) FakePLogger (class in PyNucleus_base.performanceLogger) FakeTimer (class in PyNucleus_base.performanceLogger) farFieldClusterPair (class in PyNucleus_nl.clusterMethodCy) fe_vector (class in PyNucleus_fem.DoFMaps) feFractionalOrder (class in PyNucleus_nl.fractionalOrders) fill_factor (PyNucleus_base.solvers.ilu_solver attribute) findCell() (PyNucleus_nl.clusterMethodCy.tree_node method) findCell_py() (PyNucleus_fem.meshCy.cellFinder2 method) findCells() (PyNucleus_nl.clusterMethodCy.tree_node method) findEdgeInCell_py() (PyNucleus_fem.simplexMapper.simplexMapper method) findEdgeInCellEncoded_py() (PyNucleus_fem.simplexMapper.simplexMapper method) findFaceInCell_py() (PyNucleus_fem.simplexMapper.simplexMapper method) findFaceInCellEncoded_py() (PyNucleus_fem.simplexMapper.simplexMapper method) findMinPerOverlap() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) findNodeForDoF() (PyNucleus_nl.clusterMethodCy.tree_node method) findVertexInCell_py() (PyNucleus_fem.simplexMapper.simplexMapper method)

finish() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) finishPlots() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) finiteHorizon (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) fixedTwoPointFunction (class in PyNucleus_nl.twoPointFunctions) fixedX() (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction method) (PyNucleus_nl.twoPointFunctions.twoPointFunction method) fixedY() (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction method) (PyNucleus_nl.twoPointFunctions.twoPointFunction method) flexible (PyNucleus_base.solvers.complex_gmres_solver attribute) (PyNucleus_base.solvers.gmres_solver attribute) flexible_cg() (in module PyNucleus_base.linalg) flexibleSmoother (class in PyNucleus_multilevelSolver.smoothers) flushMemory() (PyNucleus_fem.algebraicOverlaps.algebraicOverlap method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedGet method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPut method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPutLockAll method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) FMG_V (PyNucleus_multilevelSolver.multigrid.CycleType attribute) FMG_W (PyNucleus_multilevelSolver.multigrid.CycleType attribute) formatScientificLatex() (in module PyNucleus_base.plot_utils) forwardSweep (PyNucleus_multilevelSolver.smoothers.sorPreconditioner attribute) fractalDiffusivity (class in PyNucleus_fem.functions) FractionalKernel (class in PyNucleus_nl.kernelsCy) fractionalLaplacian1D (class in PyNucleus_nl.fractionalLaplacian1D) fractionalLaplacian1D_boundary (class in PyNucleus_nl.fractionalLaplacian1D) fractionalLaplacian1D_nonsym (class in PyNucleus_nl.fractionalLaplacian1D) fractionalLaplacian1DZeroExterior (class in PyNucleus_nl.fractionalLaplacian1D) fractionalLaplacian2D (class in PyNucleus_nl.fractionalLaplacian2D) fractionalLaplacian2D_boundary (class in PyNucleus_nl.fractionalLaplacian2D) fractionalLaplacian2D_nonsym (class in PyNucleus_nl.fractionalLaplacian2D) fractionalLaplacian2DZeroExterior (class in PyNucleus_nl.fractionalLaplacian2D) fractionalLaplacianProblem (class in PyNucleus_nl.nonlocalProblems) fractionalOrderBase (class in PyNucleus_nl.fractionalOrders) fractionalOrderFactoryClass (class in PyNucleus_nl.nonlocalProblems) freeze_python() (PyNucleus_base.sparsityPattern.sparsityPattern method) from_csr() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator static method) (PyNucleus_base.linear_operators.CSR_LinearOperator static method) from_dense() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator static method) (PyNucleus_base.linear_operators.CSR_LinearOperator static method) fromArray() (PyNucleus_fem.DoFMaps.DoFMap method) fromDict() (PyNucleus_base.utilsFem.outputGroup method) (PyNucleus_base.utilsFem.seriesOutputGroup method) fromLevelDict() (PyNucleus_multilevelSolver.levels.algebraicLevelBase class method) (PyNucleus_multilevelSolver.levels.meshLevel static method) fromLevelList() (PyNucleus_multilevelSolver.hierarchies.hierarchy static method) (PyNucleus_multilevelSolver.hierarchies.hierarchyManager static method) fromSet() (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.bitArray method) (PyNucleus_base.tupleDict.indexSet method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method) full() (PyNucleus_fem.DoFMaps.DoFMap method) fullSpace (class in PyNucleus_nl.interactionDomains) function (class in PyNucleus_fem.functions)

G

g (PyNucleus_fem.functions.mulVectorFunction attribute) gatherInformation() (PyNucleus_multilevelSolver.hierarchies.hierarchy method) Gauss (class in PyNucleus_fem.quadrature) Gauss1D (class in PyNucleus_fem.quadrature) Gauss2D (class in PyNucleus_fem.quadrature) Gauss3D (class in PyNucleus_fem.quadrature) GaussJacobi (class in PyNucleus_fem.quadrature) gaussSeidelSmoother (class in PyNucleus_multilevelSolver.smoothers) generateLocalMassMatrix() (in module PyNucleus_fem.DoFMaps) generateMovie() (PyNucleus_base.plot_utils.movieCreator method) generates() (in module PyNucleus_base.utilsFem) (PyNucleus_base.utilsFem.classWithComputedDependencies method) get() (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.utilsFem.seriesOutputGroup method) get_boundary_cells() (PyNucleus_fem.mesh.meshNd method) get_boundary_edge_tags() (PyNucleus_fem.mesh.meshNd method) get_boundary_edges() (PyNucleus_fem.mesh.meshNd method) get_boundary_face_tags() (PyNucleus_fem.mesh.meshNd method) get_boundary_faces() (PyNucleus_fem.mesh.meshNd method) get_boundary_vertex_tags() (PyNucleus_fem.mesh.meshNd method) get_boundary_vertices() (PyNucleus_fem.mesh.meshNd method) get_diagonal() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexdiagonalOperator method) (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.diagonalOperator method) (PyNucleus_base.linear_operators.HelmholtzShiftOperator method) (PyNucleus_base.linear_operators.identityOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.linear_operators.Multiply_Linear_Operator method) (PyNucleus_base.linear_operators.nullOperator method) (PyNucleus_base.linear_operators.sumMultiplyOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) (PyNucleus_base.linear_operators.Transpose_Linear_Operator method) (PyNucleus_fem.femCy.matrixFreeOperator method) get_diam() (PyNucleus_fem.mesh.meshNd method) get_indices_sorted() (PyNucleus_base.linear_operators.split_CSR_LinearOperator method) get_interiorVertices() (PyNucleus_fem.mesh.meshNd method) get_irregularLevelsOffset() (PyNucleus_nl.clusterMethodCy.tree_node method) get_is_leaf_py() (PyNucleus_nl.clusterMethodCy.tree_node method) get_max_cross() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) get_max_id() (PyNucleus_nl.clusterMethodCy.tree_node method) get_nodes() (PyNucleus_nl.clusterMethodCy.tree_node method) get_num_cells() (PyNucleus_fem.meshOverlaps.sharedMesh method) get_num_edges() (PyNucleus_fem.meshOverlaps.sharedMesh method) get_num_faces() (PyNucleus_fem.meshOverlaps.sharedMesh method) get_num_facets() (PyNucleus_fem.meshConstruction.segment method) get_num_holes() (PyNucleus_fem.meshConstruction.segment method) get_num_mesh_transformations() (PyNucleus_fem.meshConstruction.segment method) get_num_points() (PyNucleus_fem.meshConstruction.segment method) get_num_shared_dofs() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) get_num_vertices() (PyNucleus_fem.meshOverlaps.sharedMesh method) get_shared_dofs() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) get_surface() (PyNucleus_fem.mesh.meshNd method) get_Surface() (PyNucleus_nl.interactionDomains.ball2_barycenter method) (PyNucleus_nl.interactionDomains.ball2_dilation_barycenter method) (PyNucleus_nl.interactionDomains.ball2_dilation_retriangulation method) (PyNucleus_nl.interactionDomains.ball2_retriangulation method) (PyNucleus_nl.interactionDomains.ballInf_barycenter method) (PyNucleus_nl.interactionDomains.ballInf_retriangulation method) (PyNucleus_nl.interactionDomains.interactionDomain method) (PyNucleus_nl.interactionDomains.linearTransformInteraction method) get_surface_mesh() (PyNucleus_fem.mesh.meshNd method) get_tree_nodes() (PyNucleus_nl.clusterMethodCy.tree_node method) get_tree_nodes_on_level() (PyNucleus_nl.clusterMethodCy.tree_node method) get_tree_nodes_up_to_level() (PyNucleus_nl.clusterMethodCy.tree_node method) getAccumulateOperator() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) getAdmissibleClusters() (in module PyNucleus_nl.clusterMethodCy) getAlgebraicLevel() (PyNucleus_multilevelSolver.levels.meshLevel method) getAllNodesInGlobalCoords() (PyNucleus_fem.quadrature.simplexQuadratureRule method) getAllSharedVertices() (PyNucleus_fem.meshOverlaps.sharedMesh method) getApproximationParams() (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalPoissonProblem method) getAvailableDoFMaps() (in module PyNucleus_fem) (in module PyNucleus_fem.DoFMaps) getBlockDiagonal() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) getBoundaryAndConnectivity() (PyNucleus_fem.boundaryLayerCy.boundaryLayer method) getBoundaryCells() (in module PyNucleus_fem.meshOverlaps) getBoundaryData() (PyNucleus_fem.DoFMaps.DoFMap method) getBoundaryEdgesByTag() (PyNucleus_fem.mesh.meshNd method) getBoundaryFacesByTag() (PyNucleus_fem.mesh.meshNd method) getBoundaryKernel() (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.FractionalKernel method) (PyNucleus_nl.kernelsCy.Kernel method) getBoundaryVerticesByTag() (PyNucleus_fem.mesh.meshNd method) getBoundingBox() (PyNucleus_fem.meshPartitioning.regularVertexPartitioner method) getCanonicalName() (PyNucleus_base.factory.factory method) getCellCenters() (PyNucleus_fem.meshCy.meshBase method) getCellConnectivity() (PyNucleus_fem.meshCy.meshBase method) getCellLookup() (PyNucleus_fem.DoFMaps.DoFMap method) getCellPartition() (PyNucleus_fem.repartitioner.Repartitioner method) getComm() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) getComplement() (PyNucleus_nl.interactionDomains.ball2_barycenter method) (PyNucleus_nl.interactionDomains.ball2_retriangulation method) (PyNucleus_nl.interactionDomains.ball2Complement method) (PyNucleus_nl.interactionDomains.interactionDomain method) getComplementDoFMap() (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.DoFMaps.Product_DoFMap method) getComplementKernel() (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.FractionalKernel method) (PyNucleus_nl.kernelsCy.Kernel method) getComponent() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) getComponents() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) getCoordinateBlocks() (PyNucleus_fem.DoFMaps.DoFMap method) getCoveringClusters() (in module PyNucleus_nl.clusterMethodCy) getCuthillMckeeVertexOrder() (PyNucleus_fem.mesh.meshNd method) getData() (PyNucleus_base.linear_operators.ComplexIJOperator method) (PyNucleus_base.linear_operators.IJOperator method) getDenseOpFromApply() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) getDerivativeKernel() (PyNucleus_nl.kernelsCy.FractionalKernel method) getDim() (PyNucleus_fem.mesh.meshFactory method) (PyNucleus_nl.nonlocalProblems.nonlocalBaseProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalMeshFactoryClass method) getDistributeAsDiagonalOperator() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) getDistributeOperator() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) getDoFBoxesAndCells() (in module PyNucleus_nl.clusterMethodCy) getDoFCoordinates() (PyNucleus_fem.DoFMaps.DoFMap method) getDoFs() (PyNucleus_fem.meshOverlaps.sharedMesh method) (PyNucleus_fem.meshOverlaps.sharedMeshManager method) getDomainParams() (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) getEdgeInCell_py() (PyNucleus_fem.simplexMapper.simplexMapper method) getEdgeInCellEncoded_py() (PyNucleus_fem.simplexMapper.simplexMapper method) getEntry_py() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) getEnvVariables() (in module PyNucleus_base.utilsFem) getFaceInCell_py() (PyNucleus_fem.simplexMapper.simplexMapper method) getFaceInCellEncoded_py() (PyNucleus_fem.simplexMapper.simplexMapper method) getFractionalKernel() (in module PyNucleus_nl.kernels) getFractionalOrders() (in module PyNucleus_nl.clusterMethodCy) getFrozenKernel() (PyNucleus_nl.kernelsCy.RangedFractionalKernel method) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel method) getFullDoFMap() (PyNucleus_fem.DoFMaps.DoFMap method) getGlobalA() (PyNucleus_multilevelSolver.levels.algebraicLevel method) getGlobalIndices() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) getGlobalPartitioning() (in module PyNucleus_fem.mesh) getGlobalShapeFunction() (PyNucleus_fem.DoFMaps.DoFMap method) getGlobalVertexIndices() (PyNucleus_fem.repartitioner.Repartitioner method) getGraph() (PyNucleus_base.utilsFem.classWithComputedDependencies method) getH() (PyNucleus_multilevelSolver.levels.meshLevel method) getHessianKernel() (PyNucleus_nl.kernelsCy.FractionalKernel method) getHierarchy() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) getIdentifier() (PyNucleus_base.utilsFem.driverAddon method) getIntegrableKernel() (in module PyNucleus_nl.kernels) getInterfaces() (PyNucleus_fem.meshOverlaps.interfaceManager method) getInteriorMap() (PyNucleus_fem.mesh.mesh2d method) getInteriorVerticesByTag() (PyNucleus_fem.mesh.meshNd method) getInterval() (PyNucleus_base.performanceLogger.Timer method) getIntervalUnsynced() (PyNucleus_base.performanceLogger.Timer method) getIsDistributed() (PyNucleus_multilevelSolver.levels.meshLevel method) getIter_py() (PyNucleus_base.tupleDict.indexSet method) getKernel() (in module PyNucleus_nl.kernels) getKernelEnum() (in module PyNucleus_nl.kernelsCy) getKernelParam() (PyNucleus_nl.kernelsCy.Kernel method) getKernelParams() (PyNucleus_nl.kernelsCy.Kernel method) getKeys() (PyNucleus_multilevelSolver.levels.algebraicLevel class method) (PyNucleus_multilevelSolver.levels.algebraicLevelBase class method) getLayer() (PyNucleus_fem.boundaryLayerCy.boundaryLayer method) getLevel() (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) getLevelDict() (PyNucleus_multilevelSolver.levels.algebraicLevel method) (PyNucleus_multilevelSolver.levels.algebraicLevelBase method) (PyNucleus_multilevelSolver.levels.meshLevel method)

getLevelID() (PyNucleus_multilevelSolver.levels.level method) getLevelList() (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) (PyNucleus_multilevelSolver.hierarchies.hierarchy method) (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) getLevelNo() (PyNucleus_multilevelSolver.levels.level method) getLocalOverlap() (PyNucleus_multilevelSolver.connectors.repartitionConnector method) getLogger() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) getLoggingTimer() (in module PyNucleus_base.utilsFem) getLongDescription() (PyNucleus_nl.interactionDomains.ball1_barycenter method) (PyNucleus_nl.interactionDomains.ball1_retriangulation method) (PyNucleus_nl.interactionDomains.ball2_barycenter method) (PyNucleus_nl.interactionDomains.ball2_dilation_barycenter method) (PyNucleus_nl.interactionDomains.ball2_dilation_retriangulation method) (PyNucleus_nl.interactionDomains.ball2_retriangulation method) (PyNucleus_nl.interactionDomains.ball2Complement method) (PyNucleus_nl.interactionDomains.ballInf_barycenter method) (PyNucleus_nl.interactionDomains.ballInf_retriangulation method) (PyNucleus_nl.interactionDomains.ellipse_barycenter method) (PyNucleus_nl.interactionDomains.fullSpace method) (PyNucleus_nl.interactionDomains.interactionDomain method) (PyNucleus_nl.kernelNormalization.constantFractionalLaplacianScaling method) (PyNucleus_nl.kernelNormalization.constantIntegrableScaling method) (PyNucleus_nl.kernelNormalization.variableFractionalLaplacianScaling method) (PyNucleus_nl.kernelsCy.Kernel method) (PyNucleus_nl.twoPointFunctions.ComplexconstantTwoPoint method) (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction method) (PyNucleus_nl.twoPointFunctions.constantTwoPoint method) (PyNucleus_nl.twoPointFunctions.twoPointFunction method) getManifoldDim() (PyNucleus_fem.mesh.meshFactory method) getMappingToGlobalDoFMap() (in module PyNucleus_fem.mesh) getMemoryDiff() (PyNucleus_base.performanceLogger.Timer method) getMemorySize() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.Dense_LinearOperator method) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.Multiply_Linear_Operator method) (PyNucleus_base.linear_operators.Product_Linear_Operator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) (PyNucleus_base.linear_operators.Transpose_Linear_Operator method) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_globalData method) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator method) (PyNucleus_nl.clusterMethodCy.H2Matrix method) (PyNucleus_nl.clusterMethodCy.tree_node method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix method) getMeshOverlapsWithOtherPartition() (in module PyNucleus_fem.meshOverlaps) getMeshTransformer() (PyNucleus_fem.meshConstruction.segment method) getModifiedKernel() (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.FractionalKernel method) (PyNucleus_nl.kernelsCy.Kernel method) getMPIinfo() (in module PyNucleus_base.utilsFem) getNewHierarchy() (PyNucleus_multilevelSolver.connectors.hierarchyConnector method) (PyNucleus_multilevelSolver.connectors.inputConnector method) (PyNucleus_multilevelSolver.connectors.pCoarsenConnector method) (PyNucleus_multilevelSolver.connectors.repartitionConnector method) getnnz() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.HelmholtzShiftOperator method) (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.linear_operators.split_CSR_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) getNodalCoordinates_py() (PyNucleus_fem.DoFMaps.DoFMap method) getNodes() (in module PyNucleus_fem.mesh) getNumInterpolationNodes() (PyNucleus_base.linear_operators.interpolationOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) getNumLeavesOnLevel() (PyNucleus_nl.clusterMethodCy.tree_node method) getNumNodesOnLevel() (PyNucleus_nl.clusterMethodCy.tree_node method) getNumPartitions() (PyNucleus_fem.repartitioner.Repartitioner method) getOverlapLevel() (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) getOverlaps() (PyNucleus_fem.meshOverlaps.overlapManager method) getPair() (PyNucleus_base.utilsFem.seriesOutputGroup method) getPanelType() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.nonlocalOperator method) getParamPtrAddr() (PyNucleus_nl.kernelsCy.Kernel method) (PyNucleus_nl.twoPointFunctions.ComplexparametrizedTwoPointFunction method) (PyNucleus_nl.twoPointFunctions.parametrizedTwoPointFunction method) getParent() (PyNucleus_nl.clusterMethodCy.tree_node method) getPartitions() (PyNucleus_fem.mesh.meshNd method) getPatchLookup() (PyNucleus_fem.DoFMaps.DoFMap method) getPrintRank() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) getProjectedCenters() (PyNucleus_fem.meshCy.meshBase method) getProtoPartition() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) getProtoPartitionNonOverlapping() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) getQuadVolume() (PyNucleus_fem.quadrature.quadQuadratureRule method) getReducedMeshDoFMap() (PyNucleus_fem.DoFMaps.DoFMap method) getRelativePosition_py() (PyNucleus_nl.interactionDomains.interactionDomain method) getRepartitionedSubdomains() (PyNucleus_fem.repartitioner.Repartitioner method) getRestrictionProlongation() (PyNucleus_fem.DoFMaps.Product_DoFMap method) (PyNucleus_fem.splitting.dofmapSplitter method) (PyNucleus_fem.splitting.meshSplitter method) getRestrictionProlongationSubmesh() (in module PyNucleus_fem.mesh) getScalingWithDifferentHorizon() (PyNucleus_nl.kernelNormalization.variableFractionalLaplacianScaling method) (PyNucleus_nl.kernelNormalization.variableIntegrableScaling method) getSelectedOp() (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) getshape() (PyNucleus_base.linear_operators.sparseGraph method) getSimplex_py() (PyNucleus_fem.meshCy.meshBase method) getSimplexVolume_py() (PyNucleus_fem.quadrature.simplexQuadratureRule method) getSolution() (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver method) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver method) getState() (PyNucleus_base.utilsFem.classWithComputedDependencies method) getSubHierarchy() (PyNucleus_multilevelSolver.hierarchies.hierarchy method) (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) getSubManager() (PyNucleus_base.utilsFem.TimerManager method) (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) getSubMap() (in module PyNucleus_fem.DoFMaps) (PyNucleus_fem.splitting.dofmapSplitter method) (PyNucleus_fem.splitting.meshSplitter method) getSubMapOnFullMesh() (PyNucleus_fem.splitting.meshSplitter method) getSubMapOnSubMesh() (PyNucleus_fem.splitting.dofmapSplitter method) getSubMapRestrictionProlongation() (in module PyNucleus_fem.DoFMaps) getSubMapRestrictionProlongation2() (in module PyNucleus_fem.DoFMaps) getSubmesh() (in module PyNucleus_fem.meshCy) getSubMesh() (PyNucleus_fem.splitting.dofmapSplitter method) (PyNucleus_fem.splitting.meshSplitter method) getSubmesh2() (in module PyNucleus_fem.meshCy) getSubMeshSolution() (in module PyNucleus_fem.mesh) getSubSolution() (in module PyNucleus_fem.mesh) getSurfaceDoFMap() (in module PyNucleus_fem.femCy) getSurfaceToVolumeProlongation() (in module PyNucleus_fem.femCy) getSystemInfo() (in module PyNucleus_base.utilsFem) getTable() (PyNucleus_base.utilsFem.seriesOutputGroup method) getTimer() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) (PyNucleus_base.utilsFem.TimerManager method) getValue() (PyNucleus_base.utilsFem.classWithComputedDependencies method) getValuesAtVertices() (PyNucleus_fem.DoFMaps.P1_DoFMap method) (PyNucleus_fem.P1_DoFMap method) getVertexByLocalIndex() (PyNucleus_fem.meshOverlaps.vertexMapManager method) getVertexByOverlapIndex() (PyNucleus_fem.meshOverlaps.vertexMapManager method) getVertexDoFs() (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.DoFMaps.Product_DoFMap method) getVertexInCell_py() (PyNucleus_fem.simplexMapper.simplexMapper method) global_diam() (PyNucleus_fem.mesh.meshNd method) global_h() (PyNucleus_fem.mesh.meshNd method) global_hmin() (PyNucleus_fem.mesh.meshNd method) global_volume() (PyNucleus_fem.mesh.meshNd method) globalShapeFunction (class in PyNucleus_fem.DoFMaps) globalVertexIndices (PyNucleus_fem.repartitioner.Repartitioner property) gmres() (in module PyNucleus_base.linalg) gmres_solver (class in PyNucleus_base.solvers) gmresComplex() (in module PyNucleus_base.linalg) gmresSmoother (class in PyNucleus_multilevelSolver.smoothers) graded_circle() (in module PyNucleus_fem.mesh) graded_interval() (in module PyNucleus_fem.mesh) gradedBox() (in module PyNucleus_fem.mesh) gradedDiscWithInteraction() (in module PyNucleus_fem.mesh) gradedHypercubeTransformer (class in PyNucleus_fem.meshCy) gradedIntervals() (in module PyNucleus_fem.mesh) gradedMeshTransformer (class in PyNucleus_fem.meshCy) gradedSquare() (in module PyNucleus_fem.mesh) gradeMesh() (in module PyNucleus_fem.mesh) gradeUniformBall() (in module PyNucleus_fem.mesh) gray_scott (class in PyNucleus_fem.femCy) gray_scott_gradient (class in PyNucleus_fem.femCy)

H

h (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_multilevelSolver.levels.meshLevel property) H0 (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator attribute) (PyNucleus_nl.nonlocalOperator.nonlocalOperator attribute) H2Matrix (class in PyNucleus_nl.clusterMethodCy) hdeltaCy() (in module PyNucleus_fem.meshCy) HDF5read() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator static method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator static method) (PyNucleus_base.linear_operators.ComplexdiagonalOperator static method) (PyNucleus_base.linear_operators.ComplexLinearOperator static method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator static method) (PyNucleus_base.linear_operators.CSR_LinearOperator static method) (PyNucleus_base.linear_operators.Dense_LinearOperator static method) (PyNucleus_base.linear_operators.diagonalOperator static method) (PyNucleus_base.linear_operators.interpolationOperator static method) (PyNucleus_base.linear_operators.LinearOperator static method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator static method) (PyNucleus_base.linear_operators.prolongationOp static method) (PyNucleus_base.linear_operators.restrictionOp static method) (PyNucleus_base.linear_operators.sparseGraph static method) (PyNucleus_base.linear_operators.split_CSR_LinearOperator static method) (PyNucleus_base.linear_operators.SSS_LinearOperator static method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlap static method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager static method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager static method) (PyNucleus_fem.DoFMaps.DoFMap static method) (PyNucleus_fem.mesh.meshNd static method) (PyNucleus_nl.clusterMethodCy.H2Matrix static method) (PyNucleus_nl.clusterMethodCy.tree_node static method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix static method) HDF5readNew() (PyNucleus_nl.clusterMethodCy.tree_node static method) HDF5write() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator method) (PyNucleus_base.linear_operators.ComplexdiagonalOperator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.Dense_LinearOperator method) (PyNucleus_base.linear_operators.diagonalOperator method) (PyNucleus_base.linear_operators.interpolationOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.linear_operators.prolongationOp method) (PyNucleus_base.linear_operators.restrictionOp method) (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.linear_operators.split_CSR_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlap method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.mesh.meshNd method) (PyNucleus_nl.clusterMethodCy.H2Matrix method) (PyNucleus_nl.clusterMethodCy.tree_node method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix method)

HDF5writeNew() (PyNucleus_nl.clusterMethodCy.tree_node method) helmholtzProblem (class in PyNucleus_fem) (class in PyNucleus_fem.pdeProblems) HelmholtzShiftOperator (class in PyNucleus_base.linear_operators) hierarchy (class in PyNucleus_multilevelSolver.hierarchies) hierarchyConnector (class in PyNucleus_multilevelSolver.connectors) hierarchyIsSetUp() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) hierarchyManager (class in PyNucleus_multilevelSolver.hierarchies) hmin (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_nl.clusterMethodCy.tree_node attribute) (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator attribute) (PyNucleus_nl.nonlocalOperator.nonlocalOperator attribute) horizon (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) horizon1 (PyNucleus_nl.twoPointFunctions.interfaceTwoPoint attribute) horizon2 (PyNucleus_nl.twoPointFunctions.interfaceTwoPoint attribute) horizonFun (PyNucleus_nl.interactionDomains.interactionDomain attribute) horizonValue (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) horizonValue2 (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) Hshape() (in module PyNucleus_fem.mesh) hVector (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_nl.clusterMethodCy.tree_node attribute)

I

i (PyNucleus_base.tupleDict.indexSetIterator attribute) ichol_csr() (in module PyNucleus_base.linalg) ichol_solver (class in PyNucleus_base.solvers) ichol_sss() (in module PyNucleus_base.linalg) id (PyNucleus_nl.clusterMethodCy.tree_node attribute) identifier (PyNucleus_base.driver property) (PyNucleus_base.utilsFem.driver property) identityOperator (class in PyNucleus_base.linear_operators) idsAreUnique() (PyNucleus_nl.clusterMethodCy.tree_node method) IJOperator (class in PyNucleus_base.linear_operators) ILU_solver (class in PyNucleus_base.linalg) ilu_solver (class in PyNucleus_base.solvers) iluPreconditioner (class in PyNucleus_multilevelSolver.smoothers) iluSmoother (class in PyNucleus_multilevelSolver.smoothers) imag (class in PyNucleus_fem.functions) (PyNucleus_fem.DoFMaps.complex_fe_vector attribute) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector attribute) (PyNucleus_fem.DoFMaps.fe_vector attribute) (PyNucleus_fem.DoFMaps.multi_fe_vector attribute) inCG (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute) inclusions (class in PyNucleus_fem.functions) inclusionsHong (class in PyNucleus_fem.functions) INDEX (in module PyNucleus_base) indexSet (class in PyNucleus_base.tupleDict) indexSetIterator (class in PyNucleus_base.tupleDict) indicatorFunctor (class in PyNucleus_fem.functions) indices (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.CSR_LinearOperator attribute) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.sparseGraph attribute) (PyNucleus_base.linear_operators.SSS_LinearOperator attribute) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator attribute) (PyNucleus_base.solvers.ichol_solver attribute) indices_sorted (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.CSR_LinearOperator attribute) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.sparseGraph attribute) (PyNucleus_base.linear_operators.split_CSR_LinearOperator property) (PyNucleus_base.linear_operators.SSS_LinearOperator attribute) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator attribute) indptr (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.CSR_LinearOperator attribute) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator attribute) (PyNucleus_base.linear_operators.sparseGraph attribute) (PyNucleus_base.linear_operators.SSS_LinearOperator attribute) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator attribute) (PyNucleus_base.solvers.ichol_solver attribute) init() (PyNucleus_fem.meshCy.meshBase method) initialized (PyNucleus_base.solvers.complex_solver attribute) (PyNucleus_base.solvers.solver attribute) inner (PyNucleus_base.solvers.complex_iterative_solver attribute) (PyNucleus_base.solvers.iterative_solver attribute) (PyNucleus_fem.DoFMaps.DoFMap attribute) inner() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) innerOuterFractionalOrder (class in PyNucleus_nl.fractionalOrders) inputConnector (class in PyNucleus_multilevelSolver.connectors) inSet_py() (PyNucleus_base.tupleDict.indexSet method) inSubdomain (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute) integrate() (PyNucleus_fem.quadrature.doubleSimplexQuadratureRule method) (PyNucleus_fem.quadrature.quadQuadratureRule method) (PyNucleus_fem.quadrature.simplexQuadratureRule method) inter() (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.bitArray method) (PyNucleus_base.tupleDict.indexSet method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method) interaction (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) interactionDomain (class in PyNucleus_nl.interactionDomains) interface (PyNucleus_nl.fractionalOrders.smoothStep attribute) (PyNucleus_nl.twoPointFunctions.interfaceTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.leftRightTwoPoint attribute) interfaceManager (class in PyNucleus_fem.meshOverlaps)

interfaceProcessor (class in PyNucleus_fem.repartitioner) interfaces (PyNucleus_fem.meshOverlaps.interfaceManager property) interfaceTwoPoint (class in PyNucleus_nl.twoPointFunctions) interiorVertices (PyNucleus_fem.mesh.meshNd property) interpolate() (PyNucleus_fem.DoFMaps.DoFMap method) interpolateFE() (PyNucleus_fem.DoFMaps.P0_DoFMap method) (PyNucleus_fem.P0_DoFMap method) interpolation_order (PyNucleus_nl.clusterMethodCy.tree_node attribute) interpolationOperator (class in PyNucleus_base.linear_operators) interpret() (PyNucleus_base.utilsFem.parametrizedArg method) interval (PyNucleus_base.performanceLogger.Timer property) interval_unsynced (PyNucleus_base.performanceLogger.Timer property) intervalIndicators() (in module PyNucleus_nl.nonlocalProblems) intervalWithInteraction() (in module PyNucleus_fem.mesh) intraLevelCoarse (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute) intraLevelFine (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute) intTuple (class in PyNucleus_base.intTuple) invalid (PyNucleus_base.tupleDict.tupleDictINDEX attribute) invalidateDependencies() (PyNucleus_base.utilsFem.classWithComputedDependencies method) invDiagonal (class in PyNucleus_base.linear_operators) inversePartitionCells() (PyNucleus_fem.meshPartitioning.meshPartitioner method) inversePartitionDofs() (PyNucleus_fem.meshPartitioning.dofPartitioner method) inversePartitionVertices() (PyNucleus_fem.meshPartitioning.meshPartitioner method) (PyNucleus_fem.meshPartitioning.vertexPartitioner method) inverseTwoPoint (class in PyNucleus_nl.twoPointFunctions) ip_distributed (class in PyNucleus_base.ip_norm) ip_distributed_nonoverlapping (class in PyNucleus_base.ip_norm) ip_noop (class in PyNucleus_base.ip_norm) ip_serial (class in PyNucleus_base.ip_norm) ipBase (class in PyNucleus_base.ip_norm) irregularLevelsOffset (PyNucleus_nl.clusterMethodCy.tree_node property) isConstructed (PyNucleus_base.linear_operators.delayedConstructionOperator attribute) isCorrect() (PyNucleus_base.tupleDict.tupleDictINDEX method) isDistributed (PyNucleus_multilevelSolver.levels.meshLevel property) islandsFractionalOrder (class in PyNucleus_nl.fractionalOrders) isLeaf (PyNucleus_nl.clusterMethodCy.tree_node property) isRegistered() (PyNucleus_base.factory.factory method) (PyNucleus_base.solver_factory.solverFactory method) isRegisteredComboSolver() (PyNucleus_base.solver_factory.solverFactory method) isSetUp() (PyNucleus_multilevelSolver.hierarchies.EmptyHierarchy method) (PyNucleus_multilevelSolver.hierarchies.hierarchy method) isSorted() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.tupleDict.indexSet method) isSparse() (PyNucleus_base.linear_operators.blockOperator method) (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexdiagonalOperator method) (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.Dense_LinearOperator method) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator method) (PyNucleus_base.linear_operators.diagonalOperator method) (PyNucleus_base.linear_operators.identityOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.linear_operators.Multiply_Linear_Operator method) (PyNucleus_base.linear_operators.Product_Linear_Operator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.sumMultiplyOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) (PyNucleus_base.linear_operators.Transpose_Linear_Operator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) (PyNucleus_nl.clusterMethodCy.H2Matrix method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix method) iterationMatrix() (PyNucleus_multilevelSolver.multigrid.Complexmultigrid method) (PyNucleus_multilevelSolver.multigrid.multigrid method) iterative_solver (class in PyNucleus_base.solvers)

J

jacobi_solver (class in PyNucleus_base.solvers)

jacobiPreconditioner (class in PyNucleus_multilevelSolver.smoothers) jacobiSmoother (class in PyNucleus_multilevelSolver.smoothers)

K

K (PyNucleus_fem.femCy.stiffness_2d_sym_anisotropic_P1 attribute) keepDistributedResult (PyNucleus_fem.distributed_operators.ComplexDistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.DistributedLinearOperator attribute) Kernel (class in PyNucleus_nl.kernelsCy) kernel (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator attribute) (PyNucleus_nl.nonlocalOperator.nonlocalOperator attribute)

kernelInterpolant (PyNucleus_nl.clusterMethodCy.farFieldClusterPair attribute) kernelInterpolantVec (PyNucleus_nl.clusterMethodCy.farFieldClusterPair attribute) kernelType (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) krylov_solver (class in PyNucleus_base.solvers)

L

l (PyNucleus_fem.functions.rhsFractional2D attribute) (PyNucleus_fem.functions.solFractional2D attribute) (PyNucleus_nl.twoPointFunctions.unsymTwoPoint attribute) Lambda (class in PyNucleus_fem.functions) lambdaCoeff (PyNucleus_nl.twoPointFunctions.temperedTwoPoint attribute) lambdaFractionalOrder (class in PyNucleus_nl.fractionalOrders) lambdaTwoPoint (class in PyNucleus_nl.twoPointFunctions) lanczos() (in module PyNucleus_base.linalg) lanczos2() (in module PyNucleus_base.linalg) latexContext() (in module PyNucleus_base.plot_utils) latexFormatRate() (in module PyNucleus_base.plot_utils) latexOptions() (in module PyNucleus_base.plot_utils) layerBoundaries (PyNucleus_nl.fractionalOrders.layersFractionalOrder attribute) layerOrders (PyNucleus_nl.fractionalOrders.layersFractionalOrder attribute) layersFractionalOrder (class in PyNucleus_nl.fractionalOrders) lcl_dm (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator attribute) (PyNucleus_fem.distributed_operators.RowDistributedOperator attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) lclP (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator attribute) (PyNucleus_fem.distributed_operators.RowDistributedOperator attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) lclR (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator attribute) (PyNucleus_fem.distributed_operators.RowDistributedOperator attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) lclRoot (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) Ldata (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute) leafCoefficientsUp (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) leaves() (PyNucleus_nl.clusterMethodCy.tree_node method) left (PyNucleus_base.linear_operators.interpolationOperator attribute) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator attribute) (PyNucleus_nl.twoPointFunctions.interfaceTwoPoint attribute) leftRightFractionalOrder (class in PyNucleus_nl.fractionalOrders) leftRightTwoPoint (class in PyNucleus_nl.twoPointFunctions) length (PyNucleus_base.tupleDict.bitArray attribute) level (class in PyNucleus_multilevelSolver.levels) levelID (PyNucleus_multilevelSolver.levels.level property) levelMemory (class in PyNucleus_multilevelSolver.multigrid) levelNo (PyNucleus_multilevelSolver.levels.level property) (PyNucleus_nl.clusterMethodCy.tree_node attribute) levels (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager attribute) (PyNucleus_multilevelSolver.multigrid.Complexmultigrid attribute) (PyNucleus_multilevelSolver.multigrid.multigrid attribute) Lindices (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute)

Lindptr (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute) line (class in PyNucleus_fem.meshConstruction) linearLeftRightFractionalOrder (class in PyNucleus_nl.fractionalOrders) LinearOperator (class in PyNucleus_base.linear_operators) LinearOperator_wrapper (class in PyNucleus_base.linear_operators) linearPart() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) (PyNucleus_fem.DoFMaps.Product_DoFMap method) linearStep (class in PyNucleus_nl.fractionalOrders) linearTransformInteraction (class in PyNucleus_nl.interactionDomains) ll (PyNucleus_nl.twoPointFunctions.leftRightTwoPoint attribute) loadDictFromHDF5() (in module PyNucleus_base.utilsFem) local2overlap (PyNucleus_fem.meshOverlaps.vertexMap attribute) local_dofs (PyNucleus_nl.clusterMethodCy.tree_node attribute) local_matrix_t (class in PyNucleus_fem.femCy) localInterfaceManager (class in PyNucleus_fem.repartitioner) localMat (PyNucleus_fem.distributed_operators.ComplexRowDistributedOperator attribute) (PyNucleus_fem.distributed_operators.RowDistributedOperator attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_globalData attribute) (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) localShapeFunctions (PyNucleus_fem.DoFMaps.DoFMap attribute) LockAll() (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) log() (PyNucleus_base.utilsFem.outputGroup method) logDiffusion1D (class in PyNucleus_fem.functions) logDiffusion2D (class in PyNucleus_fem.functions) logger (PyNucleus_base.driver property) (PyNucleus_base.utilsFem.driver property) LoggingPLogger (class in PyNucleus_base.performanceLogger) LoggingTimer (class in PyNucleus_base.performanceLogger) lookupExtended (class in PyNucleus_nl.fractionalOrders) lookupFunction1D (class in PyNucleus_fem.functions) lookupFunctionTensor1DNew (class in PyNucleus_fem.functions) lookupFunctionTensor2D (class in PyNucleus_fem.functions) lookupFunctionTensor2DNew (class in PyNucleus_fem.functions) lookupFunctionTensor2DNewSym (class in PyNucleus_fem.functions) lookupFunctionTensor3D (class in PyNucleus_fem.functions) lookupFunctionTensor3DNew (class in PyNucleus_fem.functions) lookupFunctionTensor3DNewSym (class in PyNucleus_fem.functions) lookupTwoPoint (class in PyNucleus_nl.twoPointFunctions) loopOverCellEdges_py() (PyNucleus_fem.simplexMapper.simplexMapper method) loopOverCellEdgesEncoded_py() (PyNucleus_fem.simplexMapper.simplexMapper method) loopOverFaceEdges_py() (PyNucleus_fem.simplexMapper.simplexMapper method) loopOverFaceEdgesEncoded_py() (PyNucleus_fem.simplexMapper.simplexMapper method) lr (PyNucleus_nl.twoPointFunctions.leftRightTwoPoint attribute) Lshape() (in module PyNucleus_fem.mesh) lu_solver (class in PyNucleus_base.solvers)

M

M (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator attribute) (PyNucleus_base.linear_operators.TimeStepperLinearOperator attribute) M_max (PyNucleus_nl.kernelsCy.RangedFractionalKernel attribute) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel attribute) M_min (PyNucleus_nl.kernelsCy.RangedFractionalKernel attribute) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel attribute) managers (PyNucleus_fem.meshOverlaps.splitSharedMeshManager attribute) manifold (PyNucleus_nl.kernelsCy.FractionalKernel attribute) manifold_dim (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_fem.quadrature.quadratureRule attribute) mass_0d_in_1d_sym_P1 (class in PyNucleus_fem.femCy) mass_1d (class in PyNucleus_fem.femCy) mass_1d_in_2d_sym_P1 (class in PyNucleus_fem.femCy) mass_1d_in_2d_sym_P2 (class in PyNucleus_fem.femCy) mass_1d_nonsym_P0_P1 (class in PyNucleus_fem.femCy) mass_1d_sym_P0 (class in PyNucleus_fem.femCy) mass_1d_sym_P1 (class in PyNucleus_fem.femCy) mass_1d_sym_P2 (class in PyNucleus_fem.femCy) mass_1d_sym_P3 (class in PyNucleus_fem.femCy) mass_1d_sym_scalar_anisotropic (class in PyNucleus_fem.femCy) mass_2d (class in PyNucleus_fem.femCy) mass_2d_in_3d_sym_P1 (class in PyNucleus_fem.femCy) mass_2d_in_3d_sym_P2 (class in PyNucleus_fem.femCy) mass_2d_nonsym_P0_P1 (class in PyNucleus_fem.femCy) mass_2d_sym_N1e (class in PyNucleus_fem.femCy) mass_2d_sym_P0 (class in PyNucleus_fem.femCy) mass_2d_sym_P1 (class in PyNucleus_fem.femCy) mass_2d_sym_P2 (class in PyNucleus_fem.femCy) mass_2d_sym_P3 (class in PyNucleus_fem.femCy) mass_2d_sym_scalar_anisotropic (class in PyNucleus_fem.femCy) mass_3d (class in PyNucleus_fem.femCy) mass_3d_nonsym_P0_P1 (class in PyNucleus_fem.femCy) mass_3d_sym_P0 (class in PyNucleus_fem.femCy) mass_3d_sym_P1 (class in PyNucleus_fem.femCy) mass_3d_sym_P2 (class in PyNucleus_fem.femCy) mass_3d_sym_P3 (class in PyNucleus_fem.femCy) mass_3d_sym_scalar_anisotropic (class in PyNucleus_fem.femCy) mass_quadrature_matrix (class in PyNucleus_fem.femCy) mat (PyNucleus_nl.twoPointFunctions.matrixTwoPoint attribute) match() (PyNucleus_base.utilsFem.parametrizedArg method) matrixFreeOperator (class in PyNucleus_fem.femCy) matrixFunction (class in PyNucleus_fem.functions) matrixTwoPoint (class in PyNucleus_nl.twoPointFunctions) matvec() (PyNucleus_base.sparseGraph.combinedOperator method) max (PyNucleus_nl.fractionalOrders.fractionalOrderBase attribute) max_cross (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager property) max_horizon (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) max_singularity (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) maxIter (PyNucleus_base.solvers.complex_iterative_solver attribute) (PyNucleus_base.solvers.iterative_solver attribute) memOffset (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) memOffsetOther (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) memOffsetTemp (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) memoizedDigamma (class in PyNucleus_nl.kernelNormalization) memoizedFun (class in PyNucleus_nl.kernelNormalization) merge() (PyNucleus_base.tupleDict.tupleDictINDEX method) mergeData() (PyNucleus_base.tupleDict.tupleDictINDEX method) mesh (PyNucleus_fem.DoFMaps.DoFMap attribute) mesh() (PyNucleus_fem.meshConstruction.segment method) mesh0d (class in PyNucleus_fem.mesh) mesh1d (class in PyNucleus_fem.mesh) mesh2d (class in PyNucleus_fem.mesh) Mesh2Dual() (in module PyNucleus_metisCy.parmetisCy) mesh3d (class in PyNucleus_fem.mesh) meshBase (class in PyNucleus_fem.meshCy) meshFactory (class in PyNucleus_fem.mesh) meshInterface (class in PyNucleus_fem.meshOverlaps) meshLevel (class in PyNucleus_multilevelSolver.levels) meshNd (class in PyNucleus_fem.mesh) meshOverlap (class in PyNucleus_fem.meshOverlaps) meshPartitioner (class in PyNucleus_fem.meshPartitioning) meshSplitter (class in PyNucleus_fem.splitting) meshSplitter2 (class in PyNucleus_fem.splitting) meshTransformation() (PyNucleus_fem.meshConstruction.circularSegment method) meshTransformer (class in PyNucleus_fem.meshCy) metisDofPartitioner (class in PyNucleus_fem.meshPartitioning) metisMeshPartitioner (class in PyNucleus_fem.meshPartitioning) min (PyNucleus_nl.fractionalOrders.fractionalOrderBase attribute) min_singularity (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute)

mixed_node (PyNucleus_nl.clusterMethodCy.tree_node attribute) module PyNucleus_base PyNucleus_base.blas PyNucleus_base.convergence PyNucleus_base.factory PyNucleus_base.intTuple PyNucleus_base.ip_norm PyNucleus_base.linalg PyNucleus_base.linear_operators PyNucleus_base.memProfile PyNucleus_base.myTypes PyNucleus_base.performanceLogger PyNucleus_base.plot_utils PyNucleus_base.solver_factory PyNucleus_base.solvers PyNucleus_base.sparseGraph PyNucleus_base.sparsityPattern PyNucleus_base.tupleDict PyNucleus_base.utilsCy PyNucleus_base.utilsFem PyNucleus_fem PyNucleus_fem.algebraicOverlaps PyNucleus_fem.boundaryLayerCy PyNucleus_fem.distributed_operators PyNucleus_fem.DoFMaps PyNucleus_fem.femCy PyNucleus_fem.functions PyNucleus_fem.mesh PyNucleus_fem.meshConstruction PyNucleus_fem.meshCy PyNucleus_fem.meshOverlaps PyNucleus_fem.meshPartitioning PyNucleus_fem.pdeProblems PyNucleus_fem.quadrature PyNucleus_fem.repartitioner PyNucleus_fem.simplexMapper PyNucleus_fem.splitting PyNucleus_metisCy PyNucleus_metisCy.metisCy PyNucleus_metisCy.parmetisCy PyNucleus_multilevelSolver PyNucleus_multilevelSolver.coarseSolvers PyNucleus_multilevelSolver.connectors PyNucleus_multilevelSolver.geometricMG PyNucleus_multilevelSolver.hierarchies PyNucleus_multilevelSolver.levels PyNucleus_multilevelSolver.multigrid PyNucleus_multilevelSolver.restrictionProlongation PyNucleus_multilevelSolver.smoothers PyNucleus_nl.clusterMethodCy PyNucleus_nl.config PyNucleus_nl.fractionalLaplacian1D PyNucleus_nl.fractionalLaplacian2D PyNucleus_nl.fractionalOrders PyNucleus_nl.interactionDomains PyNucleus_nl.kernelNormalization PyNucleus_nl.kernels PyNucleus_nl.kernelsCy PyNucleus_nl.nonlocalBuilder PyNucleus_nl.nonlocalOperator PyNucleus_nl.nonlocalProblems PyNucleus_nl.twoPointFunctions monomial (class in PyNucleus_fem.functions) motorPermeability (class in PyNucleus_fem.functions) movieCreator (class in PyNucleus_base.plot_utils) MPIFileHandler (class in PyNucleus_base.utilsFem) mulFunction (class in PyNucleus_fem.functions) multi_fe_vector (class in PyNucleus_fem.DoFMaps) multi_function (class in PyNucleus_fem.femCy) multigrid (class in PyNucleus_multilevelSolver.multigrid) multigridPreconditioner (class in PyNucleus_multilevelSolver.multigrid) multiIntervalInterpolationOperator (class in PyNucleus_base.linear_operators) multiIntervalMeshTransformer (class in PyNucleus_fem.meshCy) multilevelAlgebraicOverlapManager (class in PyNucleus_fem.algebraicOverlaps) multiply() (in module PyNucleus_base.linear_operators) multiply2() (in module PyNucleus_base.linear_operators) Multiply_Linear_Operator (class in PyNucleus_base.linear_operators) multiply_restr() (in module PyNucleus_base.linear_operators) mulVectorFunction (class in PyNucleus_fem.functions) mySubdomainNo (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) (PyNucleus_fem.meshOverlaps.sharedMesh attribute)

N

n (PyNucleus_fem.functions.rhsFractional1D attribute) (PyNucleus_fem.functions.rhsFractional2D attribute) (PyNucleus_fem.functions.solFractional1D attribute) (PyNucleus_fem.functions.solFractional2D attribute) (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator attribute) (PyNucleus_nl.nonlocalOperator.nonlocalOperator attribute) n1 (PyNucleus_nl.clusterMethodCy.farFieldClusterPair attribute) N1e_DoFMap (class in PyNucleus_fem.DoFMaps) n2 (PyNucleus_nl.clusterMethodCy.farFieldClusterPair attribute) ndim (PyNucleus_fem.DoFMaps.complex_fe_vector attribute) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector attribute) (PyNucleus_fem.DoFMaps.fe_vector attribute) (PyNucleus_fem.DoFMaps.multi_fe_vector attribute) nearField_size (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) needsGradients (PyNucleus_fem.DoFMaps.shapeFunction attribute) newBoundaryAndTags3D() (in module PyNucleus_fem.meshCy) newRankSubdomainNo() (PyNucleus_fem.repartitioner.Repartitioner method) newSubdomainGlobalRank() (PyNucleus_fem.repartitioner.Repartitioner method) nextSubSimplex_Node_py() (PyNucleus_nl.interactionDomains.interactionDomain method) nextSubSimplex_Simplex_py() (PyNucleus_nl.interactionDomains.interactionDomain method) nnz (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator property) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator property) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator property) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator property) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator property) (PyNucleus_base.linear_operators.CSR_LinearOperator property) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator property) (PyNucleus_base.linear_operators.delayedConstructionOperator property) (PyNucleus_base.linear_operators.HelmholtzShiftOperator property) (PyNucleus_base.linear_operators.sparseGraph property) (PyNucleus_base.linear_operators.split_CSR_LinearOperator property) (PyNucleus_base.linear_operators.SSS_LinearOperator property) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator property) (PyNucleus_base.linear_operators.TimeStepperLinearOperator property) (PyNucleus_base.tupleDict.tupleDictINDEX attribute) NodeND() (in module PyNucleus_metisCy.metisCy) nodes (PyNucleus_base.linear_operators.interpolationOperator attribute) (PyNucleus_fem.DoFMaps.DoFMap attribute) (PyNucleus_fem.quadrature.quadratureRule attribute) (PyNucleus_nl.clusterMethodCy.tree_node property) nodesInGlobalCoords() (PyNucleus_fem.quadrature.quadQuadratureRule method) nodesInGlobalCoords_py() (PyNucleus_fem.quadrature.simplexQuadratureRule method) nonlocalBaseProblem (class in PyNucleus_nl.nonlocalProblems) nonlocalInterfaceProblem (class in PyNucleus_nl.nonlocalProblems) nonlocalLaplacian1D (class in PyNucleus_nl.nonlocalOperator) nonlocalLaplacian2D (class in PyNucleus_nl.nonlocalOperator) nonlocalMeshFactoryClass (class in PyNucleus_nl.nonlocalProblems) nonlocalOperator (class in PyNucleus_nl.nonlocalOperator) nonlocalPoissonProblem (class in PyNucleus_nl.nonlocalProblems) noop_solver (class in PyNucleus_base.solvers) noOpConvergenceClient (class in PyNucleus_base.convergence) noOpConvergenceCriterion (class in PyNucleus_base.convergence) noOpConvergenceMaster (class in PyNucleus_base.convergence) norm (PyNucleus_base.solvers.complex_iterative_solver attribute) (PyNucleus_base.solvers.iterative_solver attribute) (PyNucleus_fem.DoFMaps.DoFMap attribute) norm() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.functions.vectorFunction method) norm_distributed (class in PyNucleus_base.ip_norm) norm_distributed_nonoverlapping (class in PyNucleus_base.ip_norm) norm_noop (class in PyNucleus_base.ip_norm)

norm_serial (class in PyNucleus_base.ip_norm) normalized (PyNucleus_nl.kernelsCy.RangedFractionalKernel attribute) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel attribute) normBase (class in PyNucleus_base.ip_norm) NotFound NoThreads (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator attribute) (PyNucleus_base.linear_operators.CSR_LinearOperator attribute) (PyNucleus_base.linear_operators.prolongationOp attribute) (PyNucleus_base.linear_operators.restrictionOp attribute) (PyNucleus_base.linear_operators.SSS_LinearOperator attribute) nullOperator (class in PyNucleus_base.linear_operators) num_boundary_dofs (PyNucleus_fem.DoFMaps.DoFMap attribute) num_cells (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_fem.meshOverlaps.sharedMesh property) num_columns (PyNucleus_base.linear_operators.ComplexLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator attribute) (PyNucleus_base.linear_operators.LinearOperator attribute) (PyNucleus_base.linear_operators.VectorLinearOperator attribute) num_dofs (PyNucleus_fem.DoFMaps.DoFMap attribute) (PyNucleus_nl.clusterMethodCy.tree_node attribute) (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator attribute) (PyNucleus_nl.nonlocalOperator.nonlocalOperator attribute) num_edges (PyNucleus_fem.meshOverlaps.sharedMesh property) num_faces (PyNucleus_fem.meshOverlaps.sharedMesh property) num_facets (PyNucleus_fem.meshConstruction.segment property) num_far_field_cluster_pairs (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) num_holes (PyNucleus_fem.meshConstruction.segment property) num_interface_vertices (PyNucleus_fem.meshOverlaps.vertexMap attribute) num_mesh_transformations (PyNucleus_fem.meshConstruction.segment property) num_nodes (PyNucleus_fem.quadrature.quadratureRule attribute) (PyNucleus_fem.quadrature.sphericalQuadRule attribute) num_points (PyNucleus_fem.meshConstruction.segment property) num_rows (PyNucleus_base.linear_operators.ComplexLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator attribute) (PyNucleus_base.linear_operators.LinearOperator attribute) (PyNucleus_base.linear_operators.VectorLinearOperator attribute) (PyNucleus_base.solvers.complex_solver attribute) (PyNucleus_base.solvers.solver attribute) num_shared_dofs (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager property) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager property) num_subdomain_dofs (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) num_vertices (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_fem.meshOverlaps.sharedMesh property) (PyNucleus_fem.meshOverlaps.vertexMap attribute) numBlocks (PyNucleus_nl.fractionalOrders.piecewiseConstantFractionalOrder attribute) numComponents (PyNucleus_fem.DoFMaps.Product_DoFMap attribute) numInputs (PyNucleus_fem.femCy.multi_function attribute) numInterpolationNodes (PyNucleus_base.linear_operators.interpolationOperator property) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator property) numLevels (PyNucleus_nl.clusterMethodCy.tree_node property) numOutputs (PyNucleus_fem.femCy.multi_function attribute) numParameters (PyNucleus_nl.fractionalOrders.fractionalOrderBase attribute) numPartitions (PyNucleus_fem.repartitioner.Repartitioner property) numRegistered() (PyNucleus_base.factory.factory method) numSharedVecs (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) numSubdomains (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) (PyNucleus_fem.meshOverlaps.sharedMeshManager attribute) numVectors (PyNucleus_fem.DoFMaps.complex_multi_fe_vector attribute) (PyNucleus_fem.DoFMaps.multi_fe_vector attribute)

O

oldRankSubdomainNo() (PyNucleus_fem.repartitioner.Repartitioner method) oldSubdomainGlobalRank() (PyNucleus_fem.repartitioner.Repartitioner method) omega (PyNucleus_multilevelSolver.smoothers.blockJacobiPreconditioner attribute) (PyNucleus_multilevelSolver.smoothers.ComplexblockJacobiPreconditioner attribute) (PyNucleus_multilevelSolver.smoothers.ComplexjacobiPreconditioner attribute) (PyNucleus_multilevelSolver.smoothers.jacobiPreconditioner attribute) ones() (PyNucleus_base.linear_operators.ComplexDense_LinearOperator static method) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator static method) (PyNucleus_base.linear_operators.Dense_LinearOperator static method) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator static method) (PyNucleus_fem.DoFMaps.DoFMap method) operatorComplexity() (PyNucleus_multilevelSolver.multigrid.Complexmultigrid method) (PyNucleus_multilevelSolver.multigrid.multigrid method) ops (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator attribute) (PyNucleus_base.linear_operators.sumMultiplyOperator attribute) order (PyNucleus_fem.quadrature.Gauss attribute) (PyNucleus_fem.quadrature.Gauss1D attribute) (PyNucleus_fem.quadrature.Gauss2D attribute) (PyNucleus_fem.quadrature.Gauss3D attribute) (PyNucleus_fem.quadrature.GaussJacobi attribute) (PyNucleus_fem.quadrature.simplexJaskowiecSukumar attribute) (PyNucleus_fem.quadrature.simplexXiaoGimbutas attribute)

orders (PyNucleus_fem.quadrature.quadQuadratureRule attribute) (PyNucleus_fem.quadrature.simplexQuadratureRule attribute) otherSubdomainNo (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) (PyNucleus_fem.meshOverlaps.sharedMesh attribute) outputGroup (class in PyNucleus_base.utilsFem) outputParam (class in PyNucleus_base.utilsFem) outputToDict() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) overlap (PyNucleus_multilevelSolver.multigrid.Complexmultigrid attribute) (PyNucleus_multilevelSolver.multigrid.multigrid attribute) (PyNucleus_multilevelSolver.smoothers.Complexsmoother attribute) (PyNucleus_multilevelSolver.smoothers.smoother attribute) overlap2local (PyNucleus_fem.meshOverlaps.vertexMap attribute) overlapManager (class in PyNucleus_fem.meshOverlaps) overlaps (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute) (PyNucleus_fem.meshOverlaps.overlapManager property) overlapsCoarse (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute) overlapsFine (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute)

P

P (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) P0_DoFMap (class in PyNucleus_fem) (class in PyNucleus_fem.DoFMaps) P1_DoFMap (class in PyNucleus_fem) (class in PyNucleus_fem.DoFMaps) P2_DoFMap (class in PyNucleus_fem) (class in PyNucleus_fem.DoFMaps) P3_DoFMap (class in PyNucleus_fem) (class in PyNucleus_fem.DoFMaps) pacman() (in module PyNucleus_fem.mesh) parametrizedArg (class in PyNucleus_base.utilsFem) parametrizedArg() (PyNucleus_base.utilsFem.driverAddon method) parametrizedTwoPointFunction (class in PyNucleus_nl.twoPointFunctions) params (PyNucleus_base.linear_operators.delayedConstructionOperator attribute) paramsForMG() (in module PyNucleus_multilevelSolver.geometricMG) paramsForSerialMG() (in module PyNucleus_multilevelSolver.geometricMG) parent (PyNucleus_nl.clusterMethodCy.tree_node attribute) PartGraphKway() (in module PyNucleus_metisCy.metisCy) PartGraphRecursive() (in module PyNucleus_metisCy.metisCy) partition() (PyNucleus_nl.clusterMethodCy.tree_node method) partition2sparseGraph() (in module PyNucleus_fem.meshPartitioning) partitionCells() (PyNucleus_fem.meshPartitioning.meshPartitioner method) (PyNucleus_fem.meshPartitioning.metisMeshPartitioner method) (PyNucleus_fem.meshPartitioning.regularMeshPartitioner method) partitionDim() (PyNucleus_fem.meshPartitioning.regularVertexPartitioner method) partitionDofs() (PyNucleus_fem.meshPartitioning.dofPartitioner method) (PyNucleus_fem.meshPartitioning.metisDofPartitioner method) (PyNucleus_fem.meshPartitioning.regularDofPartitioner method) PartitionerException partitionVertices() (PyNucleus_fem.meshPartitioning.meshPartitioner method) (PyNucleus_fem.meshPartitioning.metisMeshPartitioner method) (PyNucleus_fem.meshPartitioning.regularMeshPartitioner method) (PyNucleus_fem.meshPartitioning.regularVertexPartitioner method) (PyNucleus_fem.meshPartitioning.vertexPartitioner method) partitionVerticesIrregular() (PyNucleus_fem.meshPartitioning.regularVertexPartitioner method) PartMeshDual() (in module PyNucleus_metisCy.metisCy) PartMeshKway() (in module PyNucleus_metisCy.parmetisCy) PartMeshNodal() (in module PyNucleus_metisCy.metisCy) pCoarsenConnector (class in PyNucleus_multilevelSolver.connectors) pCoarsenHierarchy (class in PyNucleus_multilevelSolver.hierarchies) periodicityFunctor (class in PyNucleus_fem.functions) perm (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) perm1 (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) perm2 (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) perm_c (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute) perm_r (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute) PermutationIndexer (class in PyNucleus_nl.nonlocalOperator) Pfar (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) phi (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) PHI (PyNucleus_nl.nonlocalOperator.specialQuadRule attribute) PHI3 (PyNucleus_nl.nonlocalOperator.specialQuadRule attribute) PHI_dist (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1DZeroExterior attribute) PHI_edge (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_nonsym attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2DZeroExterior attribute) PHI_edge2 (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2DZeroExterior attribute) PHI_id (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_nonsym attribute) PHI_sep (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1DZeroExterior attribute) PHI_vertex (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1DZeroExterior attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_nonsym attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2DZeroExterior attribute) PHI_vertex2 (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2DZeroExterior attribute) piecewise (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) piecewiseConstantFractionalOrder (class in PyNucleus_nl.fractionalOrders) PLogger (class in PyNucleus_base.performanceLogger) (PyNucleus_base.solvers.complex_solver attribute) (PyNucleus_base.solvers.solver attribute) (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) plot() (PyNucleus_base.utilsFem.classWithComputedDependencies method) (PyNucleus_base.utilsFem.seriesOutputGroup method) (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.DoFMap method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) (PyNucleus_fem.mesh.mesh3d method) (PyNucleus_fem.mesh.plotManager method) (PyNucleus_fem.meshConstruction.segment method) (PyNucleus_nl.clusterMethodCy.farFieldClusterPair method) (PyNucleus_nl.clusterMethodCy.H2Matrix method) (PyNucleus_nl.clusterMethodCy.tree_node method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix method) (PyNucleus_nl.kernelsCy.ComplexKernel method) (PyNucleus_nl.kernelsCy.Kernel method) (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction method) (PyNucleus_nl.twoPointFunctions.twoPointFunction method) plot_for_poster() (in module PyNucleus_base.plot_utils) plot_Node() (PyNucleus_nl.interactionDomains.interactionDomain method) plot_Node_Mesh() (PyNucleus_nl.interactionDomains.interactionDomain method) plot_Simplex() (PyNucleus_nl.interactionDomains.interactionDomain method) plot_Simplex_Mesh() (PyNucleus_nl.interactionDomains.interactionDomain method) plot_surface() (PyNucleus_fem.mesh.mesh3d method) plot_Surface() (PyNucleus_nl.interactionDomains.interactionDomain method) plot_with_beamer() (in module PyNucleus_base.plot_utils) plot_with_latex() (in module PyNucleus_base.plot_utils) plotAlgebraicOverlap() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotAlgebraicOverlapManager() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotCellPartitions() (PyNucleus_fem.mesh.mesh2d method) plotDoFMap() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotFunction() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotFunctionDoFMap() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotFunctions() (in module PyNucleus_fem.mesh) plotGraph() (PyNucleus_fem.mesh.mesh2d method) plotInterface() (PyNucleus_fem.mesh.mesh2d method) plotInterfaceVTK() (PyNucleus_fem.mesh.mesh3d method) plotManager (class in PyNucleus_fem.mesh) plotMeshOverlap() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotOverlapManager() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotPrepocess() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) plotSubMaps() (PyNucleus_fem.splitting.dofmapSplitter method) plotSubMeshes() (PyNucleus_fem.splitting.meshSplitter method) plotTriangle() (in module PyNucleus_base.plot_utils) plotVertexPartitions() (PyNucleus_fem.mesh.mesh2d method) plotVTK() (PyNucleus_fem.mesh.mesh3d method) Pnear (PyNucleus_nl.clusterMethodCy.DistributedH2Matrix_localData attribute) (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) polygon() (in module PyNucleus_fem.meshConstruction) polynomialOrder (PyNucleus_fem.DoFMaps.DoFMap attribute) posterContext() (in module PyNucleus_base.plot_utils) postsmoother_forwardSweep (PyNucleus_multilevelSolver.smoothers.sorPreconditioner attribute) power (class in PyNucleus_fem.femCy) prec (PyNucleus_base.solvers.complex_krylov_solver attribute) (PyNucleus_base.solvers.krylov_solver attribute) (PyNucleus_multilevelSolver.smoothers.ComplexseparableSmoother attribute) (PyNucleus_multilevelSolver.smoothers.separableSmoother attribute) precomputedDoFPermutations (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) precomputedSurfaceSimplexPermutations (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) precomputedVolumeSimplexPermutations (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) preconditioner (class in PyNucleus_base.solvers) (class in PyNucleus_multilevelSolver.smoothers) prepareDistribute() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) prepareDistributeMeshOverlap() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) prepareDistributeRepartition() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) prepareDistributeRepartitionSend() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) preparePlots() (PyNucleus_fem.mesh.plotManager method) prepareTransferOperators_py() (PyNucleus_nl.clusterMethodCy.tree_node method) presmoother_forwardSweep (PyNucleus_multilevelSolver.smoothers.sorPreconditioner attribute) problem (class in PyNucleus_base) (class in PyNucleus_base.utilsFem) process() (PyNucleus_base.driver method) (PyNucleus_base.problem method) (PyNucleus_base.utilsFem.driver method) (PyNucleus_base.utilsFem.driverAddon method) (PyNucleus_base.utilsFem.problem method)

process_return() (in module PyNucleus_metisCy.metisCy) (in module PyNucleus_metisCy.parmetisCy) processCmdline() (PyNucleus_base.problem method) (PyNucleus_base.utilsFem.driverAddon method) (PyNucleus_base.utilsFem.problem method) (PyNucleus_fem.diffusionProblem method) (PyNucleus_fem.pdeProblems.diffusionProblem method) (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalBaseProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalPoissonProblem method) processDictForYaml() (in module PyNucleus_base.utilsFem) processKernel() (PyNucleus_nl.nonlocalProblems.nonlocalBaseProblem method) processProblem() (PyNucleus_fem.diffusionProblem method) (PyNucleus_fem.helmholtzProblem method) (PyNucleus_fem.pdeProblems.diffusionProblem method) (PyNucleus_fem.pdeProblems.helmholtzProblem method) (PyNucleus_nl.nonlocalProblems.brusselatorProblem method) (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalInterfaceProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalPoissonProblem method) (PyNucleus_nl.nonlocalProblems.transientFractionalProblem method) prodFunction (class in PyNucleus_fem.functions) Product_DoFMap (class in PyNucleus_fem.DoFMaps) Product_Linear_Operator (class in PyNucleus_base.linear_operators) productIterator (class in PyNucleus_base.intTuple) (class in PyNucleus_nl.clusterMethodCy) productParametrizedTwoPoint (class in PyNucleus_nl.twoPointFunctions) productSpaceShapeFunction (class in PyNucleus_fem.DoFMaps) productTwoPoint (class in PyNucleus_nl.twoPointFunctions) proj (class in PyNucleus_fem.functions) project() (PyNucleus_fem.DoFMaps.DoFMap method) prolongationOp (class in PyNucleus_base.linear_operators) propertyBuilder (class in PyNucleus_base.utilsFem) prune() (PyNucleus_fem.boundaryLayerCy.boundaryLayer method) PSI (PyNucleus_nl.nonlocalOperator.specialQuadRule attribute) PSI3 (PyNucleus_nl.nonlocalOperator.specialQuadRule attribute) PSI_edge (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2DZeroExterior attribute) PSI_id (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D attribute) PSI_vertex (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2DZeroExterior attribute) PyNucleus_base module PyNucleus_base.blas module PyNucleus_base.convergence module PyNucleus_base.factory module PyNucleus_base.intTuple module PyNucleus_base.ip_norm module PyNucleus_base.linalg module PyNucleus_base.linear_operators module PyNucleus_base.memProfile module PyNucleus_base.myTypes module PyNucleus_base.performanceLogger module PyNucleus_base.plot_utils module PyNucleus_base.solver_factory module PyNucleus_base.solvers module PyNucleus_base.sparseGraph module PyNucleus_base.sparsityPattern module PyNucleus_base.tupleDict module PyNucleus_base.utilsCy module PyNucleus_base.utilsFem module PyNucleus_fem module PyNucleus_fem.algebraicOverlaps module PyNucleus_fem.boundaryLayerCy module PyNucleus_fem.distributed_operators module PyNucleus_fem.DoFMaps module PyNucleus_fem.femCy module PyNucleus_fem.functions module PyNucleus_fem.mesh module PyNucleus_fem.meshConstruction module PyNucleus_fem.meshCy module PyNucleus_fem.meshOverlaps module PyNucleus_fem.meshPartitioning module PyNucleus_fem.pdeProblems module PyNucleus_fem.quadrature module PyNucleus_fem.repartitioner module PyNucleus_fem.simplexMapper module PyNucleus_fem.splitting module PyNucleus_metisCy module PyNucleus_metisCy.metisCy module PyNucleus_metisCy.parmetisCy module PyNucleus_multilevelSolver module PyNucleus_multilevelSolver.coarseSolvers module PyNucleus_multilevelSolver.connectors module PyNucleus_multilevelSolver.geometricMG module PyNucleus_multilevelSolver.hierarchies module PyNucleus_multilevelSolver.levels module PyNucleus_multilevelSolver.multigrid module PyNucleus_multilevelSolver.restrictionProlongation module PyNucleus_multilevelSolver.smoothers module PyNucleus_nl.clusterMethodCy module PyNucleus_nl.config module PyNucleus_nl.fractionalLaplacian1D module PyNucleus_nl.fractionalLaplacian2D module PyNucleus_nl.fractionalOrders module PyNucleus_nl.interactionDomains module PyNucleus_nl.kernelNormalization module PyNucleus_nl.kernels module PyNucleus_nl.kernelsCy module PyNucleus_nl.nonlocalBuilder module PyNucleus_nl.nonlocalOperator module PyNucleus_nl.nonlocalProblems module PyNucleus_nl.twoPointFunctions module

Q

qr (PyNucleus_nl.nonlocalOperator.specialQuadRule attribute) qrEdge (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_boundary attribute) qrId (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1D attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D attribute) qrTransformed0 (PyNucleus_nl.nonlocalOperator.specialQuadRule attribute) qrTransformed1 (PyNucleus_nl.nonlocalOperator.specialQuadRule attribute) qrVertex (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1D attribute) (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1DZeroExterior attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D attribute) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_boundary attribute)

qrVertex0 (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_boundary attribute) qrVertex1 (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_boundary attribute) quad_order_diagonal (PyNucleus_nl.nonlocalOperator.nonlocalLaplacian1D attribute) (PyNucleus_nl.nonlocalOperator.nonlocalLaplacian2D attribute) quad_order_diagonalV (PyNucleus_nl.nonlocalOperator.nonlocalLaplacian2D attribute) quadQuadratureRule (class in PyNucleus_fem.quadrature) quadratureRule (class in PyNucleus_fem.quadrature) queryAdmissibility() (in module PyNucleus_nl.clusterMethodCy)

R

R (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) r (PyNucleus_nl.fractionalOrders.smoothStep attribute) (PyNucleus_nl.twoPointFunctions.smoothedLeftRightTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.unsymTwoPoint attribute) radialIndicator (class in PyNucleus_fem.functions) radialIndicators() (in module PyNucleus_nl.nonlocalProblems) radialMeshTransformation() (in module PyNucleus_fem.meshCy) radialMeshTransformer (class in PyNucleus_fem.meshCy) RangedFractionalKernel (class in PyNucleus_nl.kernelsCy) RangedVariableFractionalKernel (class in PyNucleus_nl.kernelsCy) rangeIndexSet (class in PyNucleus_base.tupleDict) rangeIndexSetIterator (class in PyNucleus_base.tupleDict) rank (PyNucleus_base.utilsCy.FakeComm_class attribute) rank_py() (PyNucleus_nl.nonlocalOperator.PermutationIndexer method) readFromHDF() (in module PyNucleus_multilevelSolver.geometricMG) readMesh() (PyNucleus_fem.mesh.meshNd static method) real (class in PyNucleus_fem.functions) REAL (in module PyNucleus_base) real (PyNucleus_fem.DoFMaps.complex_fe_vector attribute) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector attribute) (PyNucleus_fem.DoFMaps.fe_vector attribute) (PyNucleus_fem.DoFMaps.multi_fe_vector attribute) receive_py() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) rectangle() (in module PyNucleus_fem.mesh) (in module PyNucleus_fem.meshConstruction) recvPartition() (PyNucleus_fem.meshOverlaps.sharedMesh method) redistribute() (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) reduce() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) ReduceWindow (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager attribute) refine() (PyNucleus_fem.boundaryLayerCy.boundaryLayer method) (PyNucleus_fem.meshCy.meshBase method) (PyNucleus_fem.meshOverlaps.sharedMesh method) (PyNucleus_fem.meshOverlaps.sharedMeshManager method) (PyNucleus_multilevelSolver.hierarchies.hierarchy method) (PyNucleus_multilevelSolver.hierarchies.pCoarsenHierarchy method) (PyNucleus_multilevelSolver.levels.meshLevel method) (PyNucleus_nl.clusterMethodCy.tree_node method) refineCy1D() (in module PyNucleus_fem.meshCy) refineCy2DedgeVals() (in module PyNucleus_fem.meshCy) refineCy2Dhash() (in module PyNucleus_fem.meshCy) refineCy2Dsort() (in module PyNucleus_fem.meshCy) refineCy3DedgeVals() (in module PyNucleus_fem.meshCy) RefineKway() (in module PyNucleus_metisCy.parmetisCy) refParams (PyNucleus_nl.clusterMethodCy.tree_node attribute) register() (PyNucleus_base.factory.factory method) (PyNucleus_base.solver_factory.solverFactory method) (PyNucleus_fem.mesh.meshFactory method) (PyNucleus_nl.nonlocalProblems.nonlocalMeshFactoryClass method) regularDofPartitioner (class in PyNucleus_fem.meshPartitioning) regularMeshPartitioner (class in PyNucleus_fem.meshPartitioning) regularVertexPartitioner (class in PyNucleus_fem.meshPartitioning) relabelDoFs() (PyNucleus_nl.clusterMethodCy.tree_node method) relativeTolerance (PyNucleus_base.solvers.complex_iterative_solver attribute) (PyNucleus_base.solvers.iterative_solver attribute) relPos (PyNucleus_nl.interactionDomains.interactionDomain attribute) removeDuplicateVertices() (PyNucleus_fem.meshOverlaps.vertexMapManager method) removeUnusedVertices() (PyNucleus_fem.meshCy.meshBase method) removeValue_py() (PyNucleus_base.tupleDict.tupleDictINDEX method) reorder() (PyNucleus_fem.DoFMaps.DoFMap method) reorderPartitioning() (PyNucleus_fem.repartitioner.Repartitioner method) reorderVertices() (PyNucleus_fem.mesh.meshNd method)

repartitionConnector (class in PyNucleus_multilevelSolver.connectors) Repartitioner (class in PyNucleus_fem.repartitioner) replaceBoundaryEdgeTags() (PyNucleus_fem.mesh.meshNd method) replaceBoundaryVertexTags() (PyNucleus_fem.mesh.meshNd method) report() (PyNucleus_base.performanceLogger.PLogger method) (PyNucleus_nl.nonlocalProblems.nonlocalBaseProblem method) (PyNucleus_nl.nonlocalProblems.transientFractionalProblem method) requests (PyNucleus_fem.meshOverlaps.sharedMeshManager attribute) resetCoefficientsDown_py() (PyNucleus_nl.clusterMethodCy.tree_node method) resetCoefficientsUp_py() (PyNucleus_nl.clusterMethodCy.tree_node method) resetMeshInfo() (PyNucleus_fem.meshCy.meshBase method) resetUsingFEVector() (PyNucleus_fem.DoFMaps.DoFMap method) resetUsingIndicator() (PyNucleus_fem.DoFMaps.DoFMap method) residual_py() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) residuals (PyNucleus_base.solvers.complex_iterative_solver attribute) (PyNucleus_base.solvers.iterative_solver attribute) restarts (PyNucleus_base.solvers.complex_gmres_solver attribute) (PyNucleus_base.solvers.gmres_solver attribute) restrictionOp (class in PyNucleus_base.linear_operators) restrictMatrix() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.restrictionOp method) retriangulationDomain (class in PyNucleus_nl.interactionDomains) rhs (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute) (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) rhsBoundarySingularity2D (class in PyNucleus_fem.functions) rhsFractional1D (class in PyNucleus_fem.functions) rhsFractional2D (class in PyNucleus_fem.functions) rhsFractional2Dcombination (class in PyNucleus_fem.functions) rhsFractionalBrusselator_U (class in PyNucleus_fem.functions) rhsFractionalBrusselator_V (class in PyNucleus_fem.functions) rhsFunCos1DHeat (class in PyNucleus_fem.functions) rhsFunCos2DHeat (class in PyNucleus_fem.functions) rhsFunCos2DNonlinear (class in PyNucleus_fem.functions) rhsFunCos2DNonlinear_U (class in PyNucleus_fem.functions) rhsFunCos2DNonlinear_V (class in PyNucleus_fem.functions) rhsFunSource1D (class in PyNucleus_fem.functions) rhsFunSource2D (class in PyNucleus_fem.functions) rhsHr() (in module PyNucleus_fem.functions) rhsHr1D (class in PyNucleus_fem.functions) rhsHr2D (class in PyNucleus_fem.functions) rhsHr2Ddisk (class in PyNucleus_fem.functions) rhsHr3D (class in PyNucleus_fem.functions) rhsMotor (class in PyNucleus_fem.functions) rhsTestFractional_U (class in PyNucleus_fem.functions) rhsTestFractional_V (class in PyNucleus_fem.functions) rhsTestGrayScott2D_U (class in PyNucleus_fem.functions) rhsTestGrayScott2D_V (class in PyNucleus_fem.functions) right (PyNucleus_base.linear_operators.interpolationOperator attribute) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator attribute) rl (PyNucleus_nl.twoPointFunctions.leftRightTwoPoint attribute) roc() (in module PyNucleus_base.utilsFem) (PyNucleus_base.utilsFem.seriesOutputGroup method) root (PyNucleus_nl.clusterMethodCy.exactSphericalIntegral2D attribute) RowDistributedOperator (class in PyNucleus_fem.distributed_operators) rows (PyNucleus_fem.functions.vectorFunction attribute) rr (PyNucleus_nl.twoPointFunctions.leftRightTwoPoint attribute) rule1 (PyNucleus_fem.quadrature.doubleSimplexQuadratureRule attribute) rule2 (PyNucleus_fem.quadrature.doubleSimplexQuadratureRule attribute) runDriver() (in module PyNucleus_base.utilsFem)

S

S (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator attribute) (PyNucleus_base.linear_operators.TimeStepperLinearOperator attribute) s (PyNucleus_fem.functions.rhsFractional1D attribute) (PyNucleus_fem.functions.rhsFractional2D attribute) (PyNucleus_fem.functions.solFractional attribute) (PyNucleus_fem.functions.solFractional1D attribute) (PyNucleus_fem.functions.solFractional2D attribute) (PyNucleus_fem.functions.solFractionalDerivative attribute) (PyNucleus_nl.kernelsCy.FractionalKernel attribute) saveDictToHDF5() (in module PyNucleus_base.utilsFem) saveOutput() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) savePlot() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) scalar_coefficient_stiffness_1d_sym_P1 (class in PyNucleus_fem.femCy) scalar_coefficient_stiffness_1d_sym_P2 (class in PyNucleus_fem.femCy) scalar_coefficient_stiffness_2d_sym_P1 (class in PyNucleus_fem.femCy) scalar_coefficient_stiffness_2d_sym_P2 (class in PyNucleus_fem.femCy) scalar_coefficient_stiffness_3d_sym_P1 (class in PyNucleus_fem.femCy) scalar_coefficient_stiffness_3d_sym_P2 (class in PyNucleus_fem.femCy) scalarDM (PyNucleus_fem.DoFMaps.Product_DoFMap attribute) scale() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.Dense_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) scaledUpdate() (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) scaleLeft() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) scaleRight() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) scaling (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) scalingPrePhi (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) scalingValue (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) secondary_dofs (PyNucleus_nl.clusterMethodCy.tree_node attribute) segment (class in PyNucleus_fem.meshConstruction) send_py() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) sendPartition() (PyNucleus_fem.meshOverlaps.sharedMesh method) sendRHS() (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver method) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver method) separableSmoother (class in PyNucleus_multilevelSolver.smoothers) seriesOutputGroup (class in PyNucleus_base.utilsFem) set() (PyNucleus_base.driver method) (PyNucleus_base.linear_operators.interpolationOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.utilsFem.driver method) set_boundary_cells() (PyNucleus_fem.mesh.meshNd method) set_boundary_edge_tags() (PyNucleus_fem.mesh.meshNd method) set_boundary_edges() (PyNucleus_fem.mesh.meshNd method) set_boundary_face_tags() (PyNucleus_fem.mesh.meshNd method) set_boundary_faces() (PyNucleus_fem.mesh.meshNd method) set_boundary_vertex_tags() (PyNucleus_fem.mesh.meshNd method) set_boundary_vertices() (PyNucleus_fem.mesh.meshNd method) set_complex_ip_norm() (PyNucleus_fem.DoFMaps.DoFMap method) set_diagonal() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.HelmholtzShiftOperator method) (PyNucleus_base.linear_operators.LinearOperator method) set_id() (PyNucleus_nl.clusterMethodCy.tree_node method) set_ip_norm() (PyNucleus_fem.DoFMaps.DoFMap method) set_irregularLevelsOffset() (PyNucleus_nl.clusterMethodCy.tree_node method) set_py() (PyNucleus_base.tupleDict.bitArray method) setAffineBaryTransform() (PyNucleus_fem.quadrature.transformQuadratureRule method) setAinv() (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver method) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver method) setAlgebraicLevelType() (PyNucleus_multilevelSolver.levels.meshLevel method) setCell() (PyNucleus_fem.DoFMaps.shapeFunction method) setCell1_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) setCell2_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) setCommunicators() (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) setComplex() (PyNucleus_fem.algebraicOverlaps.algebraicOverlap method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) setD() (PyNucleus_multilevelSolver.smoothers.blockJacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.ComplexblockJacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.ComplexjacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.ComplexseparableSmoother method) (PyNucleus_multilevelSolver.smoothers.gaussSeidelSmoother method) (PyNucleus_multilevelSolver.smoothers.jacobiPreconditioner method) (PyNucleus_multilevelSolver.smoothers.separableSmoother method) SetDefaultOptions() (in module PyNucleus_metisCy.metisCy) setDriverArgs() (PyNucleus_base.utilsFem.driverAddon method) (PyNucleus_fem.diffusionProblem method) (PyNucleus_fem.helmholtzProblem method) (PyNucleus_fem.pdeProblems.diffusionProblem method) (PyNucleus_fem.pdeProblems.helmholtzProblem method) (PyNucleus_nl.nonlocalProblems.brusselatorProblem method) (PyNucleus_nl.nonlocalProblems.fractionalLaplacianProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalBaseProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalInterfaceProblem method) (PyNucleus_nl.nonlocalProblems.nonlocalPoissonProblem method) (PyNucleus_nl.nonlocalProblems.transientFractionalProblem method) setDriverFlag() (PyNucleus_base.utilsFem.driverAddon method) setEntry_py() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) setIdentifier() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) setInitialGuess() (PyNucleus_base.solvers.complex_iterative_solver method) (PyNucleus_base.solvers.iterative_solver method) setInterfaces() (PyNucleus_fem.meshOverlaps.interfaceManager method) setKernel() (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1D method) (PyNucleus_nl.fractionalLaplacian1D.fractionalLaplacian1D_boundary method) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D method) (PyNucleus_nl.fractionalLaplacian2D.fractionalLaplacian2D_boundary method) (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator method) (PyNucleus_nl.nonlocalOperator.nonlocalOperator method) setLinearBaryTransform() (PyNucleus_fem.quadrature.transformQuadratureRule method) setLogFile() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) setMemory() (PyNucleus_fem.algebraicOverlaps.algebraicOverlap method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapBlocking method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapPersistent method) setMesh1_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) setMesh2_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) setMeshTransformation() (PyNucleus_fem.meshCy.meshBase method) setminus() (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.indexSet method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method) setNormInner() (PyNucleus_base.solvers.complex_iterative_solver method) (PyNucleus_base.solvers.iterative_solver method) setOrder() (PyNucleus_nl.kernelsCy.RangedFractionalKernel method) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel method) setOutputGroup() (PyNucleus_base.utilsFem.TimerManager method) setOverlapNormInner() (PyNucleus_base.solvers.complex_iterative_solver method) (PyNucleus_base.solvers.iterative_solver method) setOverlaps() (PyNucleus_fem.meshOverlaps.overlapManager method) setParams() (PyNucleus_base.linear_operators.delayedConstructionOperator method) setPreconditioner() (PyNucleus_base.solvers.bicgstab_solver method) (PyNucleus_base.solvers.cg_solver method) (PyNucleus_base.solvers.complex_gmres_solver method) (PyNucleus_base.solvers.complex_krylov_solver method) (PyNucleus_base.solvers.gmres_solver method) (PyNucleus_base.solvers.krylov_solver method) setRankSize() (PyNucleus_base.utilsCy.FakeComm_class method) setshape() (PyNucleus_base.linear_operators.sparseGraph method) setShift() (PyNucleus_base.linear_operators.HelmholtzShiftOperator method) setSimplex_py() (PyNucleus_fem.femCy.simplexComputations method) setState() (PyNucleus_base.utilsFem.classWithComputedDependencies method) setSyncDefault() (in module PyNucleus_base.utilsFem) setup() (PyNucleus_base.linalg.ILU_solver method) (PyNucleus_base.solvers.bicgstab_solver method) (PyNucleus_base.solvers.cg_solver method) (PyNucleus_base.solvers.chol_solver method) (PyNucleus_base.solvers.complex_gmres_solver method) (PyNucleus_base.solvers.complex_iterative_solver method) (PyNucleus_base.solvers.complex_krylov_solver method) (PyNucleus_base.solvers.complex_lu_solver method) (PyNucleus_base.solvers.complex_solver method) (PyNucleus_base.solvers.gmres_solver method) (PyNucleus_base.solvers.ichol_solver method) (PyNucleus_base.solvers.ilu_solver method) (PyNucleus_base.solvers.iterative_solver method) (PyNucleus_base.solvers.jacobi_solver method) (PyNucleus_base.solvers.krylov_solver method) (PyNucleus_base.solvers.lu_solver method) (PyNucleus_base.solvers.noop_solver method) (PyNucleus_base.solvers.solver method) (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver method) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver method) (PyNucleus_multilevelSolver.hierarchies.hierarchyManager method) (PyNucleus_multilevelSolver.multigrid.Complexmultigrid method) (PyNucleus_multilevelSolver.multigrid.multigrid method) setValue() (PyNucleus_base.utilsFem.classWithComputedDependencies method) setVerticesCells1_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) setVerticesCells2_py() (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t method) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t method) setWindow() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedGet method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPut method) (PyNucleus_fem.algebraicOverlaps.algebraicOverlapOneSidedPutLockAll method) setZero() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator method) sFun (PyNucleus_nl.fractionalOrders.singleVariableUnsymmetricFractionalOrder attribute) shape (PyNucleus_base.linear_operators.ComplexLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator attribute) (PyNucleus_base.linear_operators.LinearOperator attribute) (PyNucleus_base.linear_operators.sparseGraph property) (PyNucleus_base.linear_operators.VectorLinearOperator attribute) (PyNucleus_fem.DoFMaps.complex_fe_vector attribute) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector attribute) (PyNucleus_fem.DoFMaps.fe_vector attribute) (PyNucleus_fem.DoFMaps.multi_fe_vector attribute)

shapeFunction (class in PyNucleus_fem.DoFMaps) shapeFunctionN1e (class in PyNucleus_fem.DoFMaps) shapeFunctionP0 (class in PyNucleus_fem.DoFMaps) shapeFunctionP1 (class in PyNucleus_fem.DoFMaps) shapeFunctionP2_edge (class in PyNucleus_fem.DoFMaps) shapeFunctionP2_vertex (class in PyNucleus_fem.DoFMaps) shapeFunctionP3_edge (class in PyNucleus_fem.DoFMaps) shapeFunctionP3_face (class in PyNucleus_fem.DoFMaps) shapeFunctionP3_vertex (class in PyNucleus_fem.DoFMaps) shared_dofs (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) sharedMesh (class in PyNucleus_fem.meshOverlaps) sharedMeshes (PyNucleus_fem.meshOverlaps.sharedMeshManager attribute) sharedMeshManager (class in PyNucleus_fem.meshOverlaps) shiftScaleFunctor (class in PyNucleus_fem.functions) shrink() (PyNucleus_fem.meshOverlaps.sharedMesh method) (PyNucleus_fem.meshOverlaps.sharedMeshManager method) simpleAnisotropy (class in PyNucleus_fem.functions) simpleAnisotropy2 (class in PyNucleus_fem.functions) simpleBox() (in module PyNucleus_fem.mesh) simpleFicheraCube() (in module PyNucleus_fem.mesh) simpleInterval() (in module PyNucleus_fem.mesh) simpleLshape() (in module PyNucleus_fem.mesh) simpleSquare() (in module PyNucleus_fem.mesh) simplex (PyNucleus_fem.meshCy.cellFinder attribute) simplexComputations (class in PyNucleus_fem.femCy) simplexComputations1D (class in PyNucleus_fem.femCy) simplexComputations2D (class in PyNucleus_fem.femCy) simplexComputations3D (class in PyNucleus_fem.femCy) simplexDuffyTransformation (class in PyNucleus_fem.quadrature) simplexJaskowiecSukumar (class in PyNucleus_fem.quadrature) simplexMapper (class in PyNucleus_fem.simplexMapper) (PyNucleus_fem.meshCy.meshBase attribute) simplexMapper0D (class in PyNucleus_fem.simplexMapper) simplexMapper1D (class in PyNucleus_fem.simplexMapper) simplexMapper2D (class in PyNucleus_fem.simplexMapper) simplexMapper3D (class in PyNucleus_fem.simplexMapper) simplexQuadratureRule (class in PyNucleus_fem.quadrature) simplexXiaoGimbutas (class in PyNucleus_fem.quadrature) singleVariableTwoPointFunction (class in PyNucleus_nl.fractionalOrders) singleVariableUnsymmetricFractionalOrder (class in PyNucleus_nl.fractionalOrders) singularityCancelationQuadRule1D (class in PyNucleus_nl.fractionalLaplacian1D) singularityCancelationQuadRule1D_boundary (class in PyNucleus_nl.fractionalLaplacian1D) singularityCancelationQuadRule2D (class in PyNucleus_nl.fractionalLaplacian2D) singularityCancelationQuadRule2D_boundary (class in PyNucleus_nl.fractionalLaplacian2D) singularityValue (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) size (PyNucleus_base.utilsCy.FakeComm_class attribute) sizeInBytes (PyNucleus_fem.meshCy.meshBase attribute) skip_leaves_upward (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) sl (PyNucleus_nl.fractionalOrders.smoothStep attribute) sliceColumn() (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.sparseGraph.combinedOperator method) sliceColumns() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) sliceRow() (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.sparseGraph.combinedOperator method) sliceRows() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) slope (PyNucleus_nl.fractionalOrders.smoothStep attribute) (PyNucleus_nl.twoPointFunctions.smoothedLeftRightTwoPoint attribute) smoothedInnerOuterFractionalOrder (class in PyNucleus_nl.fractionalOrders) smoothedLeftRightFractionalOrder (class in PyNucleus_nl.fractionalOrders) smoothedLeftRightTwoPoint (class in PyNucleus_nl.twoPointFunctions) smoother (class in PyNucleus_multilevelSolver.smoothers) (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) smootherType (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) smoothLeftRight (class in PyNucleus_nl.fractionalOrders) smoothStep (class in PyNucleus_nl.fractionalOrders) smoothStepRadial (class in PyNucleus_nl.fractionalOrders) snapMeshes() (in module PyNucleus_fem.mesh) sol (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) solBoundarySingularity2D (class in PyNucleus_fem.functions) solCos1DHeat (class in PyNucleus_fem.functions) solCos2DHeat (class in PyNucleus_fem.functions) solFractional (class in PyNucleus_fem.functions) solFractional1D (class in PyNucleus_fem.functions) solFractional2D (class in PyNucleus_fem.functions) solFractional2Dcombination (class in PyNucleus_fem.functions) solFractionalDerivative (class in PyNucleus_fem.functions) solOp (PyNucleus_base.solvers.complex_preconditioner attribute) (PyNucleus_base.solvers.preconditioner attribute) solve() (PyNucleus_base.linalg.ILU_solver method) solve_cholesky() (in module PyNucleus_base.linalg) solve_LU() (in module PyNucleus_base.linalg) solveFMG() (PyNucleus_multilevelSolver.multigrid.Complexmultigrid method) (PyNucleus_multilevelSolver.multigrid.multigrid method) solver (class in PyNucleus_base.solvers) (PyNucleus_multilevelSolver.smoothers.ComplexgmresSmoother attribute) (PyNucleus_multilevelSolver.smoothers.gmresSmoother attribute) solverFactory (class in PyNucleus_base.solver_factory) sorPreconditioner (class in PyNucleus_multilevelSolver.smoothers) sorSmoother (class in PyNucleus_multilevelSolver.smoothers) sort() (PyNucleus_fem.DoFMaps.DoFMap method) sort_indices() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.linear_operators.split_CSR_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) sortAndEncodeEdge_py() (PyNucleus_fem.simplexMapper.simplexMapper method) sortAndEncodeFace_py() (PyNucleus_fem.simplexMapper.simplexMapper method) sortEdge_py() (in module PyNucleus_fem.meshCy) sortFace_py() (in module PyNucleus_fem.meshCy) sortVertices() (PyNucleus_fem.mesh.mesh1d method) (PyNucleus_fem.mesh.mesh2d method) (PyNucleus_fem.mesh.mesh3d method) sparseGraph (class in PyNucleus_base.linear_operators) sparsityPattern (class in PyNucleus_base.sparsityPattern) specialQuadRule (class in PyNucleus_nl.nonlocalOperator) sphere() (in module PyNucleus_fem.mesh) sphere1() (in module PyNucleus_fem.mesh) sphericalIntegral (class in PyNucleus_fem.functions) sphericalQuadRule (class in PyNucleus_fem.quadrature) sphericalQuadRule1D (class in PyNucleus_fem.quadrature) sphericalQuadRule2D (class in PyNucleus_fem.quadrature) split_CSR_LinearOperator (class in PyNucleus_base.linear_operators) splitSharedMeshManager (class in PyNucleus_fem.meshOverlaps) sqrtAffineFunction (class in PyNucleus_fem.functions) squareIndicator (class in PyNucleus_fem.functions) squareIndicators() (in module PyNucleus_nl.nonlocalProblems) squareWithCircularCutout() (in module PyNucleus_fem.mesh) squareWithInteractions() (in module PyNucleus_fem.mesh) sr (PyNucleus_nl.fractionalOrders.smoothStep attribute) ssorPreconditioner (class in PyNucleus_multilevelSolver.smoothers) ssorSmoother (class in PyNucleus_multilevelSolver.smoothers) SSS_LinearOperator (class in PyNucleus_base.linear_operators) SSS_VectorLinearOperator (class in PyNucleus_base.linear_operators) standardSimplex() (in module PyNucleus_fem.mesh) standardSimplex2D() (in module PyNucleus_fem.mesh) standardSimplex3D() (in module PyNucleus_fem.mesh) startLoopOverCellEdges_py() (PyNucleus_fem.simplexMapper.simplexMapper method) startLoopOverFaceEdges_py() (PyNucleus_fem.simplexMapper.simplexMapper method) startLoopSubSimplices_Node_py() (PyNucleus_nl.interactionDomains.interactionDomain method) startLoopSubSimplices_Simplex_py() (PyNucleus_nl.interactionDomains.interactionDomain method) startMem (PyNucleus_base.performanceLogger.Timer attribute) startMemRegion() (in module PyNucleus_base.performanceLogger) startPlot() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) statisticOutputGroup (class in PyNucleus_base.utilsFem) stats() (PyNucleus_nl.kernelNormalization.memoizedFun method) stiffness_1d_in_2d_sym_P1 (class in PyNucleus_fem.femCy) stiffness_1d_in_2d_sym_P2 (class in PyNucleus_fem.femCy) stiffness_1d_in_3d_sym_P1 (class in PyNucleus_fem.femCy) stiffness_1d_sym (class in PyNucleus_fem.femCy) stiffness_1d_sym_P1 (class in PyNucleus_fem.femCy) stiffness_1d_sym_P2 (class in PyNucleus_fem.femCy) stiffness_1d_sym_P3 (class in PyNucleus_fem.femCy) stiffness_2d_in_3d_sym_P1 (class in PyNucleus_fem.femCy) stiffness_2d_in_3d_sym_P2 (class in PyNucleus_fem.femCy) stiffness_2d_sym (class in PyNucleus_fem.femCy) stiffness_2d_sym_anisotropic2_P1 (class in PyNucleus_fem.femCy) stiffness_2d_sym_anisotropic3_P1 (class in PyNucleus_fem.femCy) stiffness_2d_sym_anisotropic_P1 (class in PyNucleus_fem.femCy) stiffness_2d_sym_P1 (class in PyNucleus_fem.femCy) stiffness_2d_sym_P2 (class in PyNucleus_fem.femCy) stiffness_2d_sym_P3 (class in PyNucleus_fem.femCy) stiffness_3d_sym (class in PyNucleus_fem.femCy) stiffness_3d_sym_P1 (class in PyNucleus_fem.femCy) stiffness_3d_sym_P2 (class in PyNucleus_fem.femCy) stiffness_3d_sym_P3 (class in PyNucleus_fem.femCy) stiffness_quadrature_matrix (class in PyNucleus_fem.femCy) stitchNonoverlappingMeshes() (in module PyNucleus_fem.mesh) stitchOverlappingMeshes() (in module PyNucleus_fem.mesh) stitchSolutions() (in module PyNucleus_fem.mesh) stitchSubdomains() (in module PyNucleus_fem.mesh) str2DoFMap() (in module PyNucleus_fem) (in module PyNucleus_fem.DoFMaps) str2DoFMapOrder() (in module PyNucleus_fem) (in module PyNucleus_fem.DoFMaps) subblocks (PyNucleus_base.linear_operators.blockOperator attribute) sumFractionalOrder (class in PyNucleus_nl.fractionalOrders) sumFunction (class in PyNucleus_fem.functions) sumMultiplyOperator (class in PyNucleus_base.linear_operators) sumVectorFunction (class in PyNucleus_fem.functions) surface (PyNucleus_fem.mesh.meshNd property) sValue (PyNucleus_nl.kernelsCy.FractionalKernel attribute) symmetric (PyNucleus_fem.functions.matrixFunction attribute) (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction attribute) (PyNucleus_nl.twoPointFunctions.twoPointFunction attribute) symmetricCells (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) symmetricLocalMatrix (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) symmetrizeNearFieldClusters() (in module PyNucleus_nl.clusterMethodCy) sync() (PyNucleus_base.utilsFem.MPIFileHandler method) synchronousConvergenceClient (class in PyNucleus_base.convergence) synchronousConvergenceClientSubcomm (class in PyNucleus_base.convergence) synchronousConvergenceCriterion (class in PyNucleus_base.convergence) synchronousConvergenceMaster (class in PyNucleus_base.convergence)

T

T (PyNucleus_base.linear_operators.ComplexLinearOperator attribute) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator attribute) (PyNucleus_base.linear_operators.LinearOperator attribute) (PyNucleus_base.linear_operators.SSS_LinearOperator attribute) tabulate() (in module PyNucleus_base.plot_utils) tag (PyNucleus_fem.DoFMaps.DoFMap attribute) tagBoundaryEdges() (PyNucleus_fem.mesh.meshNd method) tagBoundaryFaces() (PyNucleus_fem.mesh.meshNd method) tagBoundaryVertices() (PyNucleus_fem.mesh.meshNd method) tagFunction (PyNucleus_fem.DoFMaps.DoFMap attribute) target_order (PyNucleus_nl.nonlocalOperator.nonlocalLaplacian1D attribute) (PyNucleus_nl.nonlocalOperator.nonlocalLaplacian2D attribute) temp (PyNucleus_base.solvers.ichol_solver attribute) (PyNucleus_multilevelSolver.multigrid.ComplexlevelMemory attribute) (PyNucleus_multilevelSolver.multigrid.levelMemory attribute) tempered (PyNucleus_nl.kernelsCy.RangedFractionalKernel attribute) temperedTwoPoint (class in PyNucleus_nl.twoPointFunctions) temperedValue (PyNucleus_nl.kernelsCy.FractionalKernel attribute) tempMemY (PyNucleus_fem.distributed_operators.ComplexDistributedLinearOperator attribute) (PyNucleus_fem.distributed_operators.DistributedLinearOperator attribute) temporaryMemory (PyNucleus_base.ip_norm.ip_distributed attribute) (PyNucleus_base.ip_norm.norm_distributed attribute) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator attribute) (PyNucleus_base.linear_operators.Product_Linear_Operator attribute) (PyNucleus_base.linear_operators.Triple_Product_Linear_Operator attribute) (PyNucleus_multilevelSolver.smoothers.ComplexgmresSmoother attribute) (PyNucleus_multilevelSolver.smoothers.ComplexseparableSmoother attribute) (PyNucleus_multilevelSolver.smoothers.gmresSmoother attribute) (PyNucleus_multilevelSolver.smoothers.separableSmoother attribute) temporaryMemory2 (PyNucleus_base.linear_operators.Triple_Product_Linear_Operator attribute) (PyNucleus_multilevelSolver.smoothers.ComplexgmresSmoother attribute) (PyNucleus_multilevelSolver.smoothers.ComplexseparableSmoother attribute) (PyNucleus_multilevelSolver.smoothers.gmresSmoother attribute) (PyNucleus_multilevelSolver.smoothers.separableSmoother attribute) tensorTwoPoint (class in PyNucleus_nl.twoPointFunctions) theta (PyNucleus_nl.interactionDomains.ellipse_barycenter attribute) (PyNucleus_nl.interactionDomains.ellipse_retriangulation attribute) Timer (class in PyNucleus_base.performanceLogger) timer (PyNucleus_base.driver property) (PyNucleus_base.utilsFem.driver property) (PyNucleus_base.utilsFem.driverAddon property) Timer() (PyNucleus_base.performanceLogger.FakePLogger method) (PyNucleus_base.performanceLogger.LoggingPLogger method) (PyNucleus_base.performanceLogger.PLogger method) TimerManager (class in PyNucleus_base.utilsFem) timerOutputGroup (class in PyNucleus_base.utilsFem) timerReport() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) TimeStepperLinearOperator (class in PyNucleus_base.linear_operators) to_csc() (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) to_csr() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexdiagonalOperator method) (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.diagonalOperator method) (PyNucleus_base.linear_operators.HelmholtzShiftOperator method) (PyNucleus_base.linear_operators.identityOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.linear_operators.Multiply_Linear_Operator method) (PyNucleus_base.linear_operators.Product_Linear_Operator method) (PyNucleus_base.linear_operators.prolongationOp method) (PyNucleus_base.linear_operators.restrictionOp method) (PyNucleus_base.linear_operators.sparseGraph method) (PyNucleus_base.linear_operators.split_CSR_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.sumMultiplyOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) (PyNucleus_base.linear_operators.Transpose_Linear_Operator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) (PyNucleus_base.linear_operators.wrapRealToComplex method) (PyNucleus_base.linear_operators.wrapRealToComplexCSR method) to_csr_linear_operator() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexdiagonalOperator method) (PyNucleus_base.linear_operators.ComplexIJOperator method) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.diagonalOperator method) (PyNucleus_base.linear_operators.HelmholtzShiftOperator method) (PyNucleus_base.linear_operators.IJOperator method) (PyNucleus_base.linear_operators.Multiply_Linear_Operator method) (PyNucleus_base.linear_operators.Product_Linear_Operator method) (PyNucleus_base.linear_operators.prolongationOp method) (PyNucleus_base.linear_operators.restrictionOp method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) (PyNucleus_base.linear_operators.Transpose_Linear_Operator method) (PyNucleus_base.linear_operators.wrapRealToComplex method) (PyNucleus_base.linear_operators.wrapRealToComplexCSR method)

to_dense() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) to_lower_csc() (PyNucleus_base.linear_operators.ComplexSSS_LinearOperator method) (PyNucleus_base.linear_operators.SSS_LinearOperator method) to_sss() (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) toarray() (PyNucleus_base.linear_operators.blockOperator method) (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexCSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexMultiply_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexProduct_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexSSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.ComplexTimeStepperLinearOperator method) (PyNucleus_base.linear_operators.ComplexTranspose_Linear_Operator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.CSR_VectorLinearOperator method) (PyNucleus_base.linear_operators.delayedConstructionOperator method) (PyNucleus_base.linear_operators.Dense_LinearOperator method) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator method) (PyNucleus_base.linear_operators.identityOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.multiIntervalInterpolationOperator method) (PyNucleus_base.linear_operators.Multiply_Linear_Operator method) (PyNucleus_base.linear_operators.nullOperator method) (PyNucleus_base.linear_operators.Product_Linear_Operator method) (PyNucleus_base.linear_operators.SSS_VectorLinearOperator method) (PyNucleus_base.linear_operators.sumMultiplyOperator method) (PyNucleus_base.linear_operators.TimeStepperLinearOperator method) (PyNucleus_base.linear_operators.Transpose_Linear_Operator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) toArray() (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.indexSet method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method) toarray() (PyNucleus_fem.DoFMaps.complex_fe_vector method) (PyNucleus_fem.DoFMaps.complex_multi_fe_vector method) (PyNucleus_fem.DoFMaps.fe_vector method) (PyNucleus_fem.DoFMaps.multi_fe_vector method) (PyNucleus_nl.clusterMethodCy.H2Matrix method) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix method) toCSR() (PyNucleus_base.sparseGraph.combinedOperator method) todense() (PyNucleus_base.linear_operators.sparseGraph method) toDict() (PyNucleus_base.tupleDict.tupleDictINDEX method) (PyNucleus_base.utilsFem.outputGroup method) (PyNucleus_base.utilsFem.seriesOutputGroup method) tolerance (PyNucleus_base.solvers.complex_iterative_solver attribute) (PyNucleus_base.solvers.iterative_solver attribute) toLinearOperator() (PyNucleus_base.linear_operators.ComplexLinearOperator method) (PyNucleus_base.linear_operators.ComplexVectorLinearOperator method) (PyNucleus_base.linear_operators.LinearOperator method) (PyNucleus_base.linear_operators.VectorLinearOperator method) toSet() (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.bitArray method) (PyNucleus_base.tupleDict.indexSet method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method) totalMemSize (PyNucleus_fem.algebraicOverlaps.algebraicOverlap attribute) transferMatrixBuilder (class in PyNucleus_nl.clusterMethodCy) transferOperator (PyNucleus_nl.clusterMethodCy.tree_node attribute) transformationRestriction (class in PyNucleus_fem.meshConstruction) transformer (PyNucleus_fem.meshCy.meshBase attribute) transformQuadratureRule (class in PyNucleus_fem.quadrature) transientFractionalProblem (class in PyNucleus_nl.nonlocalProblems) translateLocal2Overlap() (PyNucleus_fem.meshOverlaps.vertexMap method) (PyNucleus_fem.meshOverlaps.vertexMapManager method) translateOverlap2Local() (PyNucleus_fem.meshOverlaps.vertexMap method) transpose() (in module PyNucleus_base.linear_operators) (PyNucleus_base.linear_operators.ComplexCSR_LinearOperator method) (PyNucleus_base.linear_operators.ComplexDense_LinearOperator method) (PyNucleus_base.linear_operators.CSR_LinearOperator method) (PyNucleus_base.linear_operators.Dense_LinearOperator method) (PyNucleus_base.linear_operators.sparseGraph method) Transpose_Linear_Operator (class in PyNucleus_base.linear_operators) tree (PyNucleus_nl.clusterMethodCy.DistributedLinearOperator attribute) (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) tree_node (class in PyNucleus_nl.clusterMethodCy) tree_size (PyNucleus_nl.clusterMethodCy.H2Matrix attribute) (PyNucleus_nl.clusterMethodCy.VectorH2Matrix attribute) trimTree() (in module PyNucleus_nl.clusterMethodCy) Triple_Product_Linear_Operator (class in PyNucleus_base.linear_operators) tupleDictINDEX (class in PyNucleus_base.tupleDict) twinDisc() (in module PyNucleus_fem.mesh) twinDiscIndicators() (in module PyNucleus_nl.nonlocalProblems) twoPointFunction (class in PyNucleus_nl.twoPointFunctions) type (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager attribute)

U

u (PyNucleus_nl.fractionalOrders.lookupExtended attribute) Udata (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute) Uindices (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute) Uindptr (PyNucleus_base.linalg.ILU_solver attribute) (PyNucleus_base.solvers.ilu_solver attribute) UniformOnUnitSphere() (in module PyNucleus_base.linalg) uniformSquare() (in module PyNucleus_fem.mesh) uninitialized() (in module PyNucleus_base.blas) uninitialized_like() (in module PyNucleus_base.blas) uninitializedINDEX() (in module PyNucleus_base.blas) uninitializedREAL() (in module PyNucleus_base.blas) union() (PyNucleus_base.tupleDict.arrayIndexSet method) (PyNucleus_base.tupleDict.bitArray method) (PyNucleus_base.tupleDict.indexSet method) (PyNucleus_base.tupleDict.unsortedArrayIndexSet method)

unique() (PyNucleus_fem.algebraicOverlaps.algebraicOverlapManager method) (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager method) unsortedArrayIndexSet (class in PyNucleus_base.tupleDict) unsymTwoPoint (class in PyNucleus_nl.twoPointFunctions) updateBoundary1D() (in module PyNucleus_fem.meshOverlaps) updateBoundary2D() (in module PyNucleus_fem.meshOverlaps) updateBoundary3D() (in module PyNucleus_fem.meshOverlaps) updateFromDefaults() (in module PyNucleus_base.utilsFem) updateParamsFromDefaults() (PyNucleus_multilevelSolver.hierarchies.EmptyHierarchy method) (PyNucleus_multilevelSolver.hierarchies.hierarchy static method) upwardPass_py() (PyNucleus_nl.clusterMethodCy.tree_node method) use2norm (PyNucleus_base.solvers.bicgstab_solver attribute) (PyNucleus_base.solvers.cg_solver attribute) (PyNucleus_base.solvers.complex_gmres_solver attribute) (PyNucleus_base.solvers.gmres_solver attribute) useAsynchronousComm (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager attribute) useLockAll (PyNucleus_fem.algebraicOverlaps.multilevelAlgebraicOverlapManager attribute)

V

V (PyNucleus_multilevelSolver.multigrid.CycleType attribute) val (PyNucleus_base.linear_operators.interpolationOperator attribute) validate() (PyNucleus_fem.meshOverlaps.sharedMesh method) (PyNucleus_fem.meshOverlaps.sharedMeshManager method) value (PyNucleus_fem.functions.constant attribute) (PyNucleus_nl.clusterMethodCy.tree_node attribute) (PyNucleus_nl.fractionalOrders.constantExtended attribute) (PyNucleus_nl.fractionalOrders.constantNonSymFractionalOrder attribute) (PyNucleus_nl.fractionalOrders.constFractionalOrder attribute) (PyNucleus_nl.fractionalOrders.variableConstFractionalOrder attribute) (PyNucleus_nl.twoPointFunctions.ComplexconstantTwoPoint attribute) (PyNucleus_nl.twoPointFunctions.constantTwoPoint attribute) values (PyNucleus_base.performanceLogger.PLogger attribute) (PyNucleus_base.utilsCy.FakeComm_class attribute) valueSize (PyNucleus_fem.DoFMaps.shapeFunction attribute) (PyNucleus_nl.twoPointFunctions.ComplextwoPointFunction attribute) (PyNucleus_nl.twoPointFunctions.twoPointFunction attribute) variable (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) variableConstFractionalOrder (class in PyNucleus_nl.fractionalOrders) variableFractionalLaplacianScaling (class in PyNucleus_nl.kernelNormalization) variableFractionalLaplacianScalingBoundary (class in PyNucleus_nl.kernelNormalization) variableFractionalLaplacianScalingWithDifferentHorizon (class in PyNucleus_nl.kernelNormalization) variableFractionalOrder (class in PyNucleus_nl.fractionalOrders) variableHorizon (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) variableIntegrableScaling (class in PyNucleus_nl.kernelNormalization) variableIntegrableScalingWithDifferentHorizon (class in PyNucleus_nl.kernelNormalization) variableOrder (PyNucleus_nl.kernelsCy.FractionalKernel attribute)

variableScaling (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) variableSingularity (PyNucleus_nl.kernelsCy.ComplexKernel attribute) (PyNucleus_nl.kernelsCy.Kernel attribute) vec (PyNucleus_nl.fractionalOrders.feFractionalOrder attribute) vectorFunction (class in PyNucleus_fem.functions) VectorH2Matrix (class in PyNucleus_nl.clusterMethodCy) VectorLinearOperator (class in PyNucleus_base.linear_operators) vectorNorm (class in PyNucleus_fem.functions) vectorSize (PyNucleus_base.linear_operators.ComplexVectorLinearOperator attribute) (PyNucleus_base.linear_operators.VectorLinearOperator attribute) vertex2cells() (PyNucleus_fem.boundaryLayerCy.boundaryLayer method) vertexInCell_py() (PyNucleus_fem.meshCy.meshBase method) vertexMap (class in PyNucleus_fem.meshOverlaps) vertexMapManager (class in PyNucleus_fem.meshOverlaps) vertexOffsets (PyNucleus_fem.quadrature.sphericalQuadRule attribute) vertexPartitioner (class in PyNucleus_fem.meshPartitioning) vertices (PyNucleus_fem.meshCy.meshBase attribute) (PyNucleus_fem.meshOverlaps.sharedMesh attribute) vertices_as_array (PyNucleus_fem.meshCy.meshBase attribute) vl (PyNucleus_nl.twoPointFunctions.smoothedLeftRightTwoPoint attribute) vol1 (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) vol2 (PyNucleus_nl.nonlocalOperator.Complexdouble_local_matrix_t attribute) (PyNucleus_nl.nonlocalOperator.double_local_matrix_t attribute) volume (PyNucleus_fem.meshCy.meshBase attribute) volume_Node() (PyNucleus_nl.interactionDomains.interactionDomain method) volume_Node_Mesh() (PyNucleus_nl.interactionDomains.interactionDomain method) volVector (PyNucleus_fem.meshCy.meshBase attribute) vr (PyNucleus_nl.twoPointFunctions.smoothedLeftRightTwoPoint attribute)

W

W (PyNucleus_base.linear_operators.interpolationOperator attribute) w (PyNucleus_fem.functions.affineFunction attribute) (PyNucleus_fem.functions.sqrtAffineFunction attribute) W (PyNucleus_multilevelSolver.multigrid.CycleType attribute) w (PyNucleus_nl.nonlocalOperator.ComplexnonlocalOperator attribute) (PyNucleus_nl.nonlocalOperator.nonlocalOperator attribute) W_2prime (PyNucleus_base.linear_operators.interpolationOperator attribute) W_prime (PyNucleus_base.linear_operators.interpolationOperator attribute) waveFunction (class in PyNucleus_fem.functions) weights (PyNucleus_fem.quadrature.quadratureRule attribute) (PyNucleus_fem.quadrature.sphericalQuadRule attribute)

willPlot() (PyNucleus_base.driver method) (PyNucleus_base.utilsFem.driver method) wrapRealInnerToComplex (class in PyNucleus_base.ip_norm) wrapRealNormToComplex (class in PyNucleus_base.ip_norm) wrapRealToComplex (class in PyNucleus_base.linear_operators) wrapRealToComplexCSR (class in PyNucleus_base.linear_operators) wrapRealToComplexFunction (class in PyNucleus_fem.functions) wrench() (in module PyNucleus_fem.mesh) writeOverlapToMesh() (PyNucleus_fem.meshOverlaps.vertexMapManager method) writeToHDF() (in module PyNucleus_multilevelSolver.geometricMG)

X

x (PyNucleus_multilevelSolver.coarseSolvers.coarseSolver attribute) (PyNucleus_multilevelSolver.coarseSolvers.ComplexcoarseSolver attribute)

xi (PyNucleus_nl.kernelsCy.RangedFractionalKernel attribute) (PyNucleus_nl.kernelsCy.RangedVariableFractionalKernel attribute)

Z

zeros() (PyNucleus_base.linear_operators.ComplexDense_LinearOperator static method) (PyNucleus_base.linear_operators.ComplexDense_VectorLinearOperator static method) (PyNucleus_base.linear_operators.Dense_LinearOperator static method) (PyNucleus_base.linear_operators.Dense_VectorLinearOperator static method) (PyNucleus_fem.DoFMaps.DoFMap method)