Example configuration

Below is an example valid two-step configuration .yml file containing two different imaging steps:

config_file_version: 1.0
general:
  slice_thickness_um: 2.0
  max_slice_num: 3
  pre_tilt_deg: 33.5
  sectioning_axis: Z
  stage_translational_tol_um: 0.5
  stage_angular_tol_deg: 0.02
  connection_host: localhost
  connection_port: null
  EBSD_OEM: null
  EDS_OEM: null
  exp_dir: ./
  h5_log_name: log_verbose.h5
  step_count: 2
steps:
  image:
    step_general:
      step_type: image
      step_number: 1
      frequency: 1
      stage:
        rotation_side: fsl_mill
        initial_position:
          x_mm: 1.0
          y_mm: 1.999
          z_mm: 5.002
          t_deg: 0.0
          r_deg: -50.0
    beam:
      type: electron
      voltage_kv: 5.0
      voltage_tol_kv: 0.25
      current_na: 5.0
      current_tol_na: 0.25
      hfw_mm: 0.9
      working_dist_mm: 4.093
      dynamic_focus: null
      tilt_correction: null
    detector:
      type: ETD
      mode: SecondaryElectrons
      brightness: 0.2
      contrast: 0.3
      auto_cb:
        left: null
        width: null
        top: null
        height: null
    scan:
      rotation_deg: 0.0
      dwell_time_us: 1.0
      resolution: 768x512
    bit_depth: 8
  image2:
    step_general:
      step_type: image
      step_number: 2
      frequency: 1
      stage:
        rotation_side: fib_mill
        initial_position:
          x_mm: 0.0
          y_mm: 0.0
          z_mm: 0.0
          t_deg: 0.0
          r_deg: 0.0
    beam:
      type: electron
      voltage_kv: 20.0
      voltage_tol_kv: 1.0
      current_na: 0.45
      current_tol_na: 0.0225
      hfw_mm: 0.01
      working_dist_mm: 0.0
      dynamic_focus: null
      tilt_correction: null
    detector:
      type: ETD
      mode: SecondaryElectrons
      brightness: 0.2
      contrast: 0.3
      auto_cb:
        left: null
        width: null
        top: null
        height: null
    scan:
      rotation_deg: 0.0
      dwell_time_us: 1.0
      resolution: 1024x884
    bit_depth: 8