Python Module Index

d | f | p | s | v


	d
	`Database`
	`Database.build_ATLAS_db`
	`Database.build_kbase_db`
	`Database.build_KEGG_db`
	`Database.build_metacyc_db`
	`Database.build_MINE_db`
	`Database.build_modelseed`
	`Database.build_SPRESI_db`
	`Database.build_user_rxns_db`
	`Database.initialize_database`
	`Database.query`
	`Database.remove_duplicate_cpds`

	f
	`FBA`
	`FBA.build_model`
	`FBA.compare_results`
	`FBA.compareKO_results`
	`FBA.optimize_target`
	`FBA.retrieve_producable_mets`

	p
	`Parser`
	`Parser.compute_tanimoto`
	`Parser.generate_output`
	`Parser.read_targets`
	`Parser.structure_similarity`

	s
	`ShortestPath`
	`ShortestPath.constraints`
	`ShortestPath.extractinfo`
	`ShortestPath.integerprogram_pulp`

	v
	`Visualization_chemdraw`
	`Visualization_chemdraw.cdxml_editor`
	`Visualization_chemdraw.cdxml_elements`
	`Visualization_chemdraw.exclude_cpds`
	`Visualization_chemdraw.reaction_files`
	`Visualization_graphviz`
	`Visualization_graphviz.chempyutilgraph_edit`
	`Visualization_graphviz.reaction_files`
	`Visualization_graphviz.SP_Graph_dot`