Module polymers::physics::single_chain::wlc::thermodynamics::isometric

The worm-like chain (WLC) model thermodynamics in the isometric ensemble.

Modules

• legendre
  The worm-like chain (WLC) model thermodynamics in the isometric ensemble approximated using a Legendre transformation.

Structs

• WLC
  The structure of the thermodynamics of the WLC model in the isometric ensemble.

Functions

• equilibrium_distribution
  The equilibrium probability density of end-to-end vectors as a function of the end-to-end length, parameterized by the number of links, link length, and persistance length.
• equilibrium_radial_distribution
  The equilibrium probability density of end-to-end lengths as a function of the end-to-end length, parameterized by the number of links, link length, and persistance length.
• force
  The expected force as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, and persistance length.
• helmholtz_free_energy
  The Helmholtz free energy as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, hinge mass, and persistance length.
• helmholtz_free_energy_per_link
  The Helmholtz free energy per link as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, hinge mass, and persistance length.
• nondimensional_equilibrium_distribution
  The nondimensional equilibrium probability density of nondimensional end-to-end vectors per link as a function of the applied nondimensional end-to-end length per link, parameterized by the nondimensional persistance length.
• nondimensional_equilibrium_radial_distribution
  The nondimensional equilibrium probability density of nondimensional end-to-end lengths per link as a function of the nondimensional end-to-end length per link, parameterized by the nondimensional persistance length.
• nondimensional_force
  The expected nondimensional force as a function of the applied nondimensional end-to-end length per link, parameterized by the number of links and nondimensional persistance length.
• nondimensional_helmholtz_free_energy
  The nondimensional Helmholtz free energy as a function of the applied nondimensional end-to-end length per link and temperature, parameterized by the number of links, link length, hinge mass, and nondimensional persistance length.
• nondimensional_helmholtz_free_energy_per_link
  The nondimensional Helmholtz free energy per link as a function of the applied nondimensional end-to-end length per link and temperature, parameterized by the number of links, link length, and hinge mass, and nondimensional persistance length.
• nondimensional_relative_helmholtz_free_energy
  The nondimensional relative Helmholtz free energy as a function of the applied nondimensional end-to-end length per link, parameterized by the nondimensional persistance length.
• nondimensional_relative_helmholtz_free_energy_per_link
  The nondimensional relative Helmholtz free energy per link as a function of the applied nondimensional end-to-end length per link, parameterized by the number of links and nondimensional persistance length.
• relative_helmholtz_free_energy
  The relative Helmholtz free energy as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, and persistance length.
• relative_helmholtz_free_energy_per_link
  The relative Helmholtz free energy per link as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, and persistance length.