Struct polymers::physics::single_chain::ufjc::log_squared::thermodynamics::isotensional::asymptotic::LOGSQUAREDFJC

pub struct LOGSQUAREDFJC {
    pub hinge_mass: f64,
    pub link_length: f64,
    pub number_of_links: u8,
    pub link_stiffness: f64,
    pub reduced: LOGSQUAREDFJC,
    pub legendre: LOGSQUAREDFJC,
}

The structure of the log-squared-FJC model thermodynamics in the isotensional ensemble approximated using an asymptotic approach.

Fields

hinge_mass: f64

The mass of each hinge in the chain in units of kg/mol.

link_length: f64

The length of each link in the chain in units of nm.

number_of_links: u8

The number of links in the chain.

link_stiffness: f64

The stiffness of each link in the chain in units of J/(mol⋅nm^2).

reduced: LOGSQUAREDFJC

The thermodynamic functions of the model in the isotensional ensemble approximated using a reduced asymptotic approach.

legendre: LOGSQUAREDFJC

The thermodynamic functions of the model in the isotensional ensemble approximated using an asymptotic approach and a Legendre transformation.

Implementations

impl LOGSQUAREDFJC

The implemented functionality of the log-squared-FJC model thermodynamics in the isotensional ensemble approximated using an asymptotic approach.

pub fn init( number_of_links: u8, link_length: f64, hinge_mass: f64, link_stiffness: f64, ) -> Self

Initializes and returns an instance of the log-squared-FJC model thermodynamics in the isotensional ensemble approximated using an asymptotic approach.

pub fn end_to_end_length(&self, force: &f64, temperature: &f64) -> f64

The expected end-to-end length as a function of the applied force and temperature.

pub fn end_to_end_length_per_link(&self, force: &f64, temperature: &f64) -> f64

The expected end-to-end length per link as a function of the applied force and temperature.

pub fn nondimensional_end_to_end_length( &self, nondimensional_force: &f64, temperature: &f64, ) -> f64

The expected nondimensional end-to-end length as a function of the applied nondimensional force.

pub fn nondimensional_end_to_end_length_per_link( &self, nondimensional_force: &f64, temperature: &f64, ) -> f64

The expected nondimensional end-to-end length per link as a function of the applied nondimensional force.

pub fn gibbs_free_energy(&self, force: &f64, temperature: &f64) -> f64

The Gibbs free energy as a function of the applied force and temperature.

pub fn gibbs_free_energy_per_link(&self, force: &f64, temperature: &f64) -> f64

The Gibbs free energy per link as a function of the applied force and temperature.

pub fn relative_gibbs_free_energy(&self, force: &f64, temperature: &f64) -> f64

The relative Gibbs free energy as a function of the applied force and temperature.

pub fn relative_gibbs_free_energy_per_link( &self, force: &f64, temperature: &f64, ) -> f64

The relative Gibbs free energy per link as a function of the applied force and temperature.

pub fn nondimensional_gibbs_free_energy( &self, nondimensional_force: &f64, temperature: &f64, ) -> f64

The nondimensional Gibbs free energy as a function of the applied nondimensional force and temperature.

pub fn nondimensional_gibbs_free_energy_per_link( &self, nondimensional_force: &f64, temperature: &f64, ) -> f64

The nondimensional Gibbs free energy per link as a function of the applied nondimensional force and temperature.

pub fn nondimensional_relative_gibbs_free_energy( &self, nondimensional_force: &f64, temperature: &f64, ) -> f64

The nondimensional relative Gibbs free energy as a function of the applied nondimensional force.

pub fn nondimensional_relative_gibbs_free_energy_per_link( &self, nondimensional_force: &f64, temperature: &f64, ) -> f64

The nondimensional relative Gibbs free energy per link as a function of the applied nondimensional force.