Expand description

The freely-jointed chain (FJC) model thermodynamics in the isometric ensemble approximated using a Legendre transformation.

Structs§

  • The structure of the thermodynamics of the FJC model in the isometric ensemble approximated using a Legendre transformation.

Functions§

  • The equilibrium probability density of end-to-end vectors as a function of the end-to-end length, parameterized by the number of links and link length.
  • The equilibrium probability density of end-to-end lengths as a function of the end-to-end length, parameterized by the number of links and link length.
  • The expected force as a function of the applied end-to-end length and temperature, parameterized by the number of links and link length.
  • The Gibbs free energy as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, and hinge mass.
  • The Gibbs free energy per link as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, and hinge mass.
  • The Helmholtz free energy as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, and hinge mass.
  • The Helmholtz free energy per link as a function of the applied end-to-end length and temperature, parameterized by the number of links, link length, and hinge mass.
  • The nondimensional equilibrium probability density of nondimensional end-to-end vectors per link as a function of the nondimensional end-to-end length per link, parameterized by the number of links.
  • The nondimensional equilibrium probability density of nondimensional end-to-end lengths per link as a function of the nondimensional end-to-end length per link, parameterized by the number of links.
  • The expected nondimensional force as a function of the applied nondimensional end-to-end length per link.
  • The nondimensional Gibbs free energy as a function of the applied nondimensional end-to-end length per link and temperature, parameterized by the number of links, link length, and hinge mass.
  • The nondimensional Gibbs free energy per link as a function of the applied nondimensional end-to-end length per link and temperature, parameterized by the number of links, link length, and hinge mass.
  • The nondimensional Helmholtz free energy as a function of the nondimensional end-to-end length per link and temperature, parameterized by the number of links, link length, and hinge mass.
  • The nondimensional Helmholtz free energy per link as a function of the nondimensional end-to-end length per link and temperature, parameterized by the number of links, link length, and hinge mass.
  • The nondimensional relative Gibbs free energy as a function of the applied nondimensional end-to-end length per link, parameterized by the number of links.
  • The nondimensional relative Gibbs free energy per link as a function of the applied nondimensional end-to-end length per link, parameterized by the number of links.
  • The nondimensional relative Helmholtz free energy as a function of the nondimensional end-to-end length per link, parameterized by the number of links.
  • The nondimensional relative Helmholtz free energy per link as a function of the nondimensional end-to-end length per link.
  • The relative Gibbs free energy as a function of the applied end-to-end length and temperature, parameterized by the number of links and link length.
  • The relative Gibbs free energy per link as a function of the applied end-to-end length and temperature, parameterized by the number of links and link length.
  • The relative Helmholtz free energy as a function of the applied end-to-end length and temperature, parameterized by the number of links and link length.
  • The relative Helmholtz free energy per link as a function of the applied end-to-end length and temperature, parameterized by the number of links and link length.