Index

_

_abc_impl (optimism.FunctionSpace.DofManager attribute) (optimism.FunctionSpace.EssentialBC attribute) (optimism.FunctionSpace.FunctionSpace attribute) (optimism.Interpolants.ParentElement attribute) (optimism.Interpolants.ShapeFunctions attribute) (optimism.Mechanics.DynamicsFunctions attribute) (optimism.Mechanics.MechanicsFunctions attribute) (optimism.Mechanics.NewmarkParameters attribute) (optimism.QuadratureRule.QuadratureRule attribute) _adagio_neohookean() (in module optimism.material.Neohookean) _asdict() (optimism.AlSolver.Settings method) (optimism.EquationSolver.Settings method) (optimism.material.Hardening.HardeningModel method) (optimism.material.Hardening.RateSensitivityModel method) (optimism.material.MaterialModel.MaterialModel method) (optimism.material.MaterialModel.MatProps method) (optimism.material.MaterialUniaxialSimulator.UniaxialOutput method) (optimism.Mesh.Mesh method) (optimism.MinimizeScalar.Settings method) (optimism.NewtonSolver.Settings method) (optimism.Objective.Params method) (optimism.phasefield.MaterialPointSimulator.UniaxialOutput method) (optimism.phasefield.PhaseField.PhaseFieldFunctions method) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel method) (optimism.phasefield.PhaseFieldThreshold.Properties method) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties method) (optimism.ScalarRootFind.Settings method) (optimism.ScalarRootFind.SolutionInfo method) (optimism.TrustRegionSPG.Settings method) (optimism.VTKWriter.VTKWriter.VTKFieldRecord method) _check_and_format_data() (optimism.VTKWriter.VTKWriter method) _class_cleanups (optimism.contact.test.test_Contact.TestContactFrictionData attribute) (optimism.contact.test.test_Cpp.TestEdgeIntersection attribute) (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection attribute) (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection attribute) (optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint attribute) (optimism.contact.test.test_MortarGeom.TestMortarGeom attribute) (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture attribute) (optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver attribute) (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver attribute) (optimism.contact.test.test_Search.TestDoubleMeshFixture attribute) (optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture attribute) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture attribute) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodySelfContactFixture attribute) (optimism.material.test.test_Gent.TestGentMaterial attribute) (optimism.material.test.test_Hardening.PowerLawHardeningTestFixture attribute) (optimism.material.test.test_Hardening.VoceHardeningTestFixture attribute) (optimism.material.test.test_HyperVisco.HyperViscoModelFixture attribute) (optimism.material.test.test_HyperVisco.HyperViscoUniaxialStrain attribute) (optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture attribute) (optimism.material.test.test_J2Plastic.J2PlasticUniaxial attribute) (optimism.material.test.test_J2Plastic.J2UpdateFixture attribute) (optimism.material.test.test_J2Plastic.PlasticityOnMesh attribute) (optimism.material.test.test_LinearElastic.TestLinearElasticMaterial attribute) (optimism.material.test.test_MaterialUniaxialSimulator.MaterialUniaxialSimulatorFixture attribute) (optimism.material.test.test_MultiBranchHyperVisco.HyperViscoModelFixture attribute) (optimism.material.test.test_MultiBranchHyperVisco.HyperViscoUniaxialStrain attribute) (optimism.material.test.test_RateSensitivity.RateSensitivityFixture attribute) (optimism.material.test.test_RateSensitivity.RateSentivityInsideJ2 attribute) (optimism.phasefield.test.plotPhaseFieldThresholdModel.PhaseFieldThresholdUniaxialFixture attribute) (optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture attribute) (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture attribute) (optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture attribute) (optimism.phasefield.test.test_PhaseFieldThresholdPatch.TestSingleMeshFixture attribute) (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture attribute) (optimism.phasefield.test.test_PhaseFieldUniaxial.PhaseFieldUniaxialFixture attribute) (optimism.test.MeshFixture.MeshFixture attribute) (optimism.test.test_AxisymmPatchTest.AxisymmPatchTest attribute) (optimism.test.test_DofManager.DofManagerTest attribute) (optimism.test.test_EquationSolver.EquationSolverFixture attribute) (optimism.test.test_FunctionSpace.ParameterizationTestSuite attribute) (optimism.test.test_FunctionSpace.TestFunctionSpaceFixture attribute) (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture attribute) (optimism.test.test_FunctionSpace.TestFunctionSpaceSingleQuadPointFixture attribute) (optimism.test.test_Interpolants.TestBubbleInterpolants attribute) (optimism.test.test_Interpolants.TestInterpolants attribute) (optimism.test.test_JaxConfig.TestJaxConfiguration attribute) (optimism.test.test_LinAlg.TestLinAlg attribute) (optimism.test.test_Math.TestMathInnerProduct attribute) (optimism.test.test_Math.TestMathSum attribute) (optimism.test.test_Mechanics.MechanicsFunctionsFixture attribute) (optimism.test.test_Mesh.TestSingleMeshFixture attribute) (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture attribute) (optimism.test.test_Newmark.DynamicPatchTest attribute) (optimism.test.test_Newmark.DynamicsFixture attribute) (optimism.test.test_Objective.TestObjective attribute) (optimism.test.test_PatchTest.LinearPatchTestLinearElements attribute) (optimism.test.test_PatchTest.LinearPatchTestQuadraticElements attribute) (optimism.test.test_PatchTest.QuadraticPatchTestQuadraticElements attribute) (optimism.test.test_PatchTestPou.PatchTestQuadraticElements attribute) (optimism.test.test_QuadratureRule.TestQuadratureRules attribute) (optimism.test.test_ReadExodusMesh.TestMeshReadData attribute) (optimism.test.test_ReadExodusMesh.TestMeshReadPatchTest attribute) (optimism.test.test_ReadExodusMesh.TestMeshReadPropertiesTest attribute) (optimism.test.test_ReadMesh.TestMeshReadData attribute) (optimism.test.test_ReadMesh.TestMeshReadPatchTest attribute) (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture attribute) (optimism.test.test_SmoothFunctions.TestSmoothFunctions attribute) (optimism.test.test_SparseMatrix.SparsePatchFixture attribute) (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture attribute) (optimism.test.test_Surface.TestSingleMeshFixture attribute) (optimism.test.test_TensorMath.TensorMathFixture attribute) (optimism.test.test_Traction.TractionPatch attribute) (optimism.test.test_TrustRegionSPG.TestProjectionOnBoundary attribute) (optimism.test.test_TrustRegionSPG.TestSubproblemSolveFixture attribute) (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture attribute) (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock attribute) (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture attribute) (optimism.test.test_VolumeAverageJ.TestVolumeAverage attribute) (optimism.test.test_VTKWriter.TestVTKWriter attribute) (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder attribute) (optimism.test.TestFixture.TestFixture attribute) _classSetupFailed (optimism.contact.test.test_Contact.TestContactFrictionData attribute) (optimism.contact.test.test_Cpp.TestEdgeIntersection attribute) (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection attribute) (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection attribute) (optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint attribute) (optimism.contact.test.test_MortarGeom.TestMortarGeom attribute) (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture attribute) (optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver attribute) (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver attribute) (optimism.contact.test.test_Search.TestDoubleMeshFixture attribute) (optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture attribute) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture attribute) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodySelfContactFixture attribute) (optimism.material.test.test_Gent.TestGentMaterial attribute) (optimism.material.test.test_Hardening.PowerLawHardeningTestFixture attribute) (optimism.material.test.test_Hardening.VoceHardeningTestFixture attribute) (optimism.material.test.test_HyperVisco.HyperViscoModelFixture attribute) (optimism.material.test.test_HyperVisco.HyperViscoUniaxialStrain attribute) (optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture attribute) (optimism.material.test.test_J2Plastic.J2PlasticUniaxial attribute) (optimism.material.test.test_J2Plastic.J2UpdateFixture attribute) (optimism.material.test.test_J2Plastic.PlasticityOnMesh attribute) (optimism.material.test.test_LinearElastic.TestLinearElasticMaterial attribute) (optimism.material.test.test_MaterialUniaxialSimulator.MaterialUniaxialSimulatorFixture attribute) (optimism.material.test.test_MultiBranchHyperVisco.HyperViscoModelFixture attribute) (optimism.material.test.test_MultiBranchHyperVisco.HyperViscoUniaxialStrain attribute) (optimism.material.test.test_RateSensitivity.RateSensitivityFixture attribute) (optimism.material.test.test_RateSensitivity.RateSentivityInsideJ2 attribute) (optimism.phasefield.test.plotPhaseFieldThresholdModel.PhaseFieldThresholdUniaxialFixture attribute) (optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture attribute) (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture attribute) (optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture attribute) (optimism.phasefield.test.test_PhaseFieldThresholdPatch.TestSingleMeshFixture attribute) (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture attribute) (optimism.phasefield.test.test_PhaseFieldUniaxial.PhaseFieldUniaxialFixture attribute) (optimism.test.MeshFixture.MeshFixture attribute) (optimism.test.test_AxisymmPatchTest.AxisymmPatchTest attribute) (optimism.test.test_DofManager.DofManagerTest attribute) (optimism.test.test_EquationSolver.EquationSolverFixture attribute) (optimism.test.test_FunctionSpace.ParameterizationTestSuite attribute) (optimism.test.test_FunctionSpace.TestFunctionSpaceFixture attribute) (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture attribute) (optimism.test.test_FunctionSpace.TestFunctionSpaceSingleQuadPointFixture attribute) (optimism.test.test_Interpolants.TestBubbleInterpolants attribute) (optimism.test.test_Interpolants.TestInterpolants attribute) (optimism.test.test_JaxConfig.TestJaxConfiguration attribute) (optimism.test.test_LinAlg.TestLinAlg attribute) (optimism.test.test_Math.TestMathInnerProduct attribute) (optimism.test.test_Math.TestMathSum attribute) (optimism.test.test_Mechanics.MechanicsFunctionsFixture attribute) (optimism.test.test_Mesh.TestSingleMeshFixture attribute) (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture attribute) (optimism.test.test_Newmark.DynamicPatchTest attribute) (optimism.test.test_Newmark.DynamicsFixture attribute) (optimism.test.test_Objective.TestObjective attribute) (optimism.test.test_PatchTest.LinearPatchTestLinearElements attribute) (optimism.test.test_PatchTest.LinearPatchTestQuadraticElements attribute) (optimism.test.test_PatchTest.QuadraticPatchTestQuadraticElements attribute) (optimism.test.test_PatchTestPou.PatchTestQuadraticElements attribute) (optimism.test.test_QuadratureRule.TestQuadratureRules attribute) (optimism.test.test_ReadExodusMesh.TestMeshReadData attribute) (optimism.test.test_ReadExodusMesh.TestMeshReadPatchTest attribute) (optimism.test.test_ReadExodusMesh.TestMeshReadPropertiesTest attribute) (optimism.test.test_ReadMesh.TestMeshReadData attribute) (optimism.test.test_ReadMesh.TestMeshReadPatchTest attribute) (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture attribute) (optimism.test.test_SmoothFunctions.TestSmoothFunctions attribute) (optimism.test.test_SparseMatrix.SparsePatchFixture attribute) (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture attribute) (optimism.test.test_Surface.TestSingleMeshFixture attribute) (optimism.test.test_TensorMath.TensorMathFixture attribute) (optimism.test.test_Traction.TractionPatch attribute) (optimism.test.test_TrustRegionSPG.TestProjectionOnBoundary attribute) (optimism.test.test_TrustRegionSPG.TestSubproblemSolveFixture attribute) (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture attribute) (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock attribute) (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture attribute) (optimism.test.test_VolumeAverageJ.TestVolumeAverage attribute) (optimism.test.test_VTKWriter.TestVTKWriter attribute) (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder attribute) (optimism.test.TestFixture.TestFixture attribute)

_compute_block_diagonal_element_stiffnesses() (in module optimism.phasefield.PhaseField) _compute_dissipated_energy() (in module optimism.material.HyperViscoelastic) (in module optimism.material.MultiBranchHyperViscoelastic) _compute_dissipation() (in module optimism.material.J2Plastic) _compute_elastic_infinitesimal_strain() (in module optimism.J2PlasticPhaseField) _compute_elastic_linear_strain() (in module optimism.phasefield.PhaseFieldLorentzPlastic) _compute_elastic_logarithmic_strain() (in module optimism.material.HyperViscoelastic) (in module optimism.material.MultiBranchHyperViscoelastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) _compute_element_masses() (in module optimism.Mechanics) _compute_element_stiffnesses() (in module optimism.Mechanics) (in module optimism.phasefield.PhaseField) _compute_element_stiffnesses_multi_block() (in module optimism.Mechanics) _compute_initial_state_multi_block() (in module optimism.Mechanics) _compute_kinetic_energy() (in module optimism.Mechanics) _compute_newmark_element_hessians() (in module optimism.Mechanics) _compute_state_increment() (in module optimism.material.HyperViscoelastic) (in module optimism.material.MultiBranchHyperViscoelastic) _compute_state_new() (in module optimism.material.HyperViscoelastic) (in module optimism.material.MultiBranchHyperViscoelastic) (in module optimism.material.Neohookean) _compute_strain_energy() (in module optimism.Mechanics) _compute_strain_energy_multi_block() (in module optimism.Mechanics) _compute_updated_internal_variables() (in module optimism.Mechanics) _compute_updated_internal_variables_multi_block() (in module optimism.Mechanics) _dissipation_potential() (in module optimism.material.HyperViscoelastic) (in module optimism.material.MultiBranchHyperViscoelastic) _energy_density() (in module optimism.material.HyperViscoelastic) (in module optimism.material.J2Plastic) (in module optimism.material.MultiBranchHyperViscoelastic) _eq_strain_energy() (in module optimism.material.HyperViscoelastic) (in module optimism.material.MultiBranchHyperViscoelastic) _exp_relative_difference() (in module optimism.TensorMath) _exp_symm_jvp() (in module optimism.TensorMath) _field_defaults (optimism.AlSolver.Settings attribute) (optimism.EquationSolver.Settings attribute) (optimism.material.Hardening.HardeningModel attribute) (optimism.material.Hardening.RateSensitivityModel attribute) (optimism.material.MaterialModel.MaterialModel attribute) (optimism.material.MaterialModel.MatProps attribute) (optimism.material.MaterialUniaxialSimulator.UniaxialOutput attribute) (optimism.Mesh.Mesh attribute) (optimism.MinimizeScalar.Settings attribute) (optimism.NewtonSolver.Settings attribute) (optimism.Objective.Params attribute) (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) (optimism.ScalarRootFind.Settings attribute) (optimism.ScalarRootFind.SolutionInfo attribute) (optimism.TrustRegionSPG.Settings attribute) (optimism.VTKWriter.VTKWriter.VTKFieldRecord attribute) _fields (optimism.AlSolver.Settings attribute) (optimism.EquationSolver.Settings attribute) (optimism.material.Hardening.HardeningModel attribute) (optimism.material.Hardening.RateSensitivityModel attribute) (optimism.material.MaterialModel.MaterialModel attribute) (optimism.material.MaterialModel.MatProps attribute) (optimism.material.MaterialUniaxialSimulator.UniaxialOutput attribute) (optimism.Mesh.Mesh attribute) (optimism.MinimizeScalar.Settings attribute) (optimism.NewtonSolver.Settings attribute) (optimism.Objective.Params attribute) (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) (optimism.ScalarRootFind.Settings attribute) (optimism.ScalarRootFind.SolutionInfo attribute) (optimism.TrustRegionSPG.Settings attribute) (optimism.VTKWriter.VTKWriter.VTKFieldRecord attribute) _float_split() (in module optimism.Math) _gauss_quad_1D_1pt() (in module optimism.QuadratureRule) _gauss_quad_1D_2pt() (in module optimism.QuadratureRule) _gauss_quad_1D_3pt() (in module optimism.QuadratureRule) _gauss_quad_1D_4pt() (in module optimism.QuadratureRule) _gauss_quad_1D_5pt() (in module optimism.QuadratureRule) _gent_3D_energy_density() (in module optimism.material.Gent) _get_vertex_nodes_from_exodus_tri6_mesh() (in module optimism.ReadExodusMesh) _linear_elastic_energy_density() (in module optimism.material.LinearElastic) _log_relative_difference() (in module optimism.TensorMath) _log_symm_jvp() (in module optimism.TensorMath) _logm_iss() (in module optimism.LinAlg) _make() (optimism.AlSolver.Settings class method) (optimism.EquationSolver.Settings class method) (optimism.material.Hardening.HardeningModel class method) (optimism.material.Hardening.RateSensitivityModel class method) (optimism.material.MaterialModel.MaterialModel class method) (optimism.material.MaterialModel.MatProps class method) (optimism.material.MaterialUniaxialSimulator.UniaxialOutput class method) (optimism.Mesh.Mesh class method) (optimism.MinimizeScalar.Settings class method) (optimism.NewtonSolver.Settings class method) (optimism.Objective.Params class method) (optimism.phasefield.MaterialPointSimulator.UniaxialOutput class method) (optimism.phasefield.PhaseField.PhaseFieldFunctions class method) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel class method) (optimism.phasefield.PhaseFieldThreshold.Properties class method) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties class method) (optimism.ScalarRootFind.Settings class method) (optimism.ScalarRootFind.SolutionInfo class method) (optimism.TrustRegionSPG.Settings class method) (optimism.VTKWriter.VTKWriter.VTKFieldRecord class method) _make_hessian_bc_mask() (optimism.FunctionSpace.DofManager method) _make_hessian_coordinates() (optimism.FunctionSpace.DofManager method) _make_properties() (in module optimism.material.Gent) (in module optimism.material.HyperViscoelastic) (in module optimism.material.LinearElastic) (in module optimism.material.MultiBranchHyperViscoelastic) (in module optimism.material.Neohookean) _neighbor_search() (in module optimism.contact.MortarContact) _neohookean_3D_energy_density() (in module optimism.material.Neohookean) _neq_strain_energy() (in module optimism.material.HyperViscoelastic) (in module optimism.material.MultiBranchHyperViscoelastic) _pow_relative_difference() (in module optimism.TensorMath) _pow_symm_jvp() (in module optimism.TensorMath) _read_block_conns() (in module optimism.ReadExodusMesh) _read_block_maps() (in module optimism.ReadExodusMesh) _read_block_variable_values() (in module optimism.ReadExodusMesh) _read_blocks() (in module optimism.ReadExodusMesh) _read_coordinates() (in module optimism.ReadExodusMesh) _read_element_type() (in module optimism.ReadExodusMesh) _read_names_list() (in module optimism.ReadExodusMesh) _read_node_sets() (in module optimism.ReadExodusMesh) _read_side_sets() (in module optimism.ReadExodusMesh) _relative_log_difference() (in module optimism.TensorMath) _relative_log_difference_no_tolerance_check() (in module optimism.TensorMath) _relative_log_difference_taylor() (in module optimism.TensorMath) _replace() (optimism.AlSolver.Settings method) (optimism.EquationSolver.Settings method) (optimism.material.Hardening.HardeningModel method) (optimism.material.Hardening.RateSensitivityModel method) (optimism.material.MaterialModel.MaterialModel method) (optimism.material.MaterialModel.MatProps method) (optimism.material.MaterialUniaxialSimulator.UniaxialOutput method) (optimism.Mesh.Mesh method) (optimism.MinimizeScalar.Settings method) (optimism.NewtonSolver.Settings method) (optimism.Objective.Params method) (optimism.phasefield.MaterialPointSimulator.UniaxialOutput method) (optimism.phasefield.PhaseField.PhaseFieldFunctions method) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel method) (optimism.phasefield.PhaseFieldThreshold.Properties method) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties method) (optimism.ScalarRootFind.Settings method) (optimism.ScalarRootFind.SolutionInfo method) (optimism.TrustRegionSPG.Settings method) (optimism.VTKWriter.VTKWriter.VTKFieldRecord method) _return_Gneq_id_for_branch() (in module optimism.material.MultiBranchHyperViscoelastic) _return_state_for_branch() (in module optimism.material.MultiBranchHyperViscoelastic) _sqrt_relative_difference() (in module optimism.TensorMath) _sqrt_symm_jvp() (in module optimism.TensorMath) _start_time (optimism.Timer.Timer attribute) _symmetric_matrix_function_jvp_helper() (in module optimism.TensorMath) _two_product() (in module optimism.Math) _two_sum() (in module optimism.Math) _write_cell_connectivity() (optimism.VTKWriter.VTKWriter method) _write_cell_fields() (optimism.VTKWriter.VTKWriter method) _write_cell_types() (optimism.VTKWriter.VTKWriter method) _write_contact_edges() (optimism.VTKWriter.VTKWriter method) _write_coordinate_data() (optimism.VTKWriter.VTKWriter method) _write_header() (optimism.VTKWriter.VTKWriter method) _write_nodal_fields() (optimism.VTKWriter.VTKWriter method) _write_out_all_fields_in_dict() (optimism.VTKWriter.VTKWriter method)

A

abs() (in module optimism.SmoothFunctions) add_cell_field() (optimism.VTKWriter.VTKWriter method) add_contact_edges() (optimism.VTKWriter.VTKWriter method) add_nodal_field() (optimism.VTKWriter.VTKWriter method) add_sphere() (optimism.VTKWriter.VTKWriter method) add_vector() (optimism.EquationSolverSubspace.ModelProblem method) app_data (optimism.Objective.Params attribute) apply() (optimism.SparseCholesky.SparseCholesky method) apply_precond() (optimism.Objective.Objective method) apply_transpose() (optimism.SparseCholesky.SparseCholesky method) are_inside_unit_interval() (in module optimism.test.test_QuadratureRule) are_positive_weights() (in module optimism.test.test_QuadratureRule) area() (in module optimism.contact.EdgeCpp) arrow() (optimism.contact.test.SlidePlot.slide_plot method) assemble_area_weighted_gaps() (in module optimism.contact.MortarContact)

assemble_nodal_areas() (in module optimism.contact.MortarContact) assemble_sparse_stiffness_matrix() (in module optimism.SparseMatrixAssembler) assembly_mortar_integral() (in module optimism.contact.IntegralPenaltyContact) (in module optimism.contact.MortarContact) assertArrayEqual() (optimism.test.TestFixture.TestFixture method) assertArrayNear() (optimism.test.TestFixture.TestFixture method) assertArrayNotEqual() (optimism.test.TestFixture.TestFixture method) assertNear() (optimism.test.TestFixture.TestFixture method) augmented_lagrange_solve() (in module optimism.AlSolver) average_quadrature_field_over_element() (in module optimism.FunctionSpace) axisymmetric_element_gradient_transformation() (in module optimism.Mechanics) (in module optimism.phasefield.PhaseField) axisymmetric_gradient() (in module optimism.Mechanics) (in module optimism.phasefield.PhaseField) AxisymmPatchTest (class in optimism.test.test_AxisymmPatchTest)

B

baseFileName (optimism.test.test_VTKWriter.TestVTKWriter attribute) (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder attribute) bc_data (optimism.Objective.Params attribute) bcIndices (optimism.FunctionSpace.DofManager attribute) beta (optimism.Mechanics.NewmarkParameters attribute) bisection_step() (in module optimism.ScalarRootFind)

BIT (optimism.VTKWriter.VTKDataType attribute) block_maps (optimism.Mesh.Mesh attribute), [1] blocks (optimism.Mesh.Mesh attribute), [1] bound_constrained_solve() (in module optimism.BoundConstrainedSolver) bound_constrained_trust_region_minimize() (in module optimism.TrustRegionSPG) BoundConstrainedObjective (class in optimism.BoundConstrainedObjective)

C

cauchy_point_decrease_tol (optimism.TrustRegionSPG.Settings attribute) cauchy_point_max_line_search_iters (optimism.TrustRegionSPG.Settings attribute) cauchy_point_sufficient_decrease_factor (optimism.TrustRegionSPG.Settings attribute) cg_inexact_solve_ratio (optimism.EquationSolver.Settings attribute) cg_inner_products_preconditioned() (in module optimism.EquationSolver) cg_inner_products_unpreconditioned() (in module optimism.EquationSolver) cg_tol (optimism.EquationSolver.Settings attribute) CHAR (optimism.VTKWriter.VTKDataType attribute) check_quadratic() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) check_stability (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) check_stability() (optimism.Objective.Objective method) (optimism.SparseCholesky.SparseCholesky method) combine_blocks() (in module optimism.Mesh) combine_mesh() (in module optimism.Mesh) combine_nodesets() (in module optimism.Mesh) combine_sidesets() (in module optimism.Mesh) combined() (in module optimism.contact.Levelset) component (optimism.FunctionSpace.EssentialBC attribute) compute_algorithmic_energy (optimism.Mechanics.DynamicsFunctions attribute) compute_average_normal() (in module optimism.contact.MortarContact) compute_block_diagonal_element_stiffnesses (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_closest_distance_to_each_side() (in module optimism.contact.Contact) compute_closest_distance_to_each_side_smooth() (in module optimism.contact.Contact) compute_closest_edges_and_field_weights() (in module optimism.contact.Contact) compute_constraint_hessian (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_contact_point_coordinates() (in module optimism.contact.LevelsetConstraint) compute_contact_point_coords_on_edge() (in module optimism.contact.LevelsetConstraint) compute_edge_levelset_constraints() (in module optimism.contact.LevelsetConstraint) compute_edge_penalty_contact_energy() (in module optimism.contact.PenaltyContact) compute_edge_vectors() (in module optimism.Mesh) (in module optimism.Surface) compute_elastic_linear_strain() (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) compute_elastic_logarithmic_strain() (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) compute_elastic_seth_hill_strain() (in module optimism.material.J2Plastic) compute_elastic_strain() (in module optimism.phasefield.PhaseFieldThresholdPlastic) compute_element_energy() (in module optimism.phasefield.PhaseFieldThresholdPlastic) compute_element_field_gradient() (in module optimism.FunctionSpace) compute_element_hessians (optimism.Mechanics.DynamicsFunctions attribute) compute_element_masses (optimism.Mechanics.DynamicsFunctions attribute) compute_element_stiffness_from_global_fields() (in module optimism.Mechanics) (in module optimism.phasefield.PhaseField) compute_element_stiffnesses (optimism.Mechanics.MechanicsFunctions attribute) (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_element_volumes() (in module optimism.FunctionSpace) compute_element_volumes_axisymmetric() (in module optimism.FunctionSpace) compute_energy_density (optimism.material.MaterialModel.MaterialModel attribute) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) compute_error() (in module optimism.contact.test.test_MortarGeom) compute_field_gradient() (in module optimism.FunctionSpace) compute_fisher_burmeister_linearization() (in module optimism.contact.PenaltyContact) compute_flow_direction() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) compute_flow_stress (optimism.material.Hardening.HardeningModel attribute) compute_free_energy_density() (in module optimism.phasefield.PhaseFieldLorentzPlastic) compute_friction_energy_from_perp_slip() (in module optimism.contact.Friction) compute_friction_potential() (in module optimism.contact.Contact) (in module optimism.contact.LevelsetConstraint) compute_friction_potential_on_edge() (in module optimism.contact.LevelsetConstraint) compute_grid_field() (in module optimism.contact.test.test_Cpp) compute_hardening_energy_density (optimism.material.Hardening.HardeningModel attribute) compute_initial_state (optimism.material.MaterialModel.MaterialModel attribute) (optimism.Mechanics.DynamicsFunctions attribute) (optimism.Mechanics.MechanicsFunctions attribute) (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) compute_internal_energy (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_intersection() (in module optimism.contact.IntegralPenaltyContact) (in module optimism.contact.MortarContact) compute_levelset_constraints() (in module optimism.contact.LevelsetConstraint) compute_linear_strain() (in module optimism.phasefield.PhaseFieldThreshold) compute_logarithmic_elastic_strain() (in module optimism.J2PlasticPhaseField) compute_logarithmic_strain() (in module optimism.phasefield.PhaseFieldThreshold) compute_material_qoi (optimism.material.MaterialModel.MaterialModel attribute) compute_min_p() (in module optimism.NewtonSolver) compute_newmark_lagrangian() (in module optimism.Mechanics) compute_normal() (in module optimism.contact.IntegralPenaltyContact) (in module optimism.contact.MortarContact) (in module optimism.Surface) compute_normal_from_a() (in module optimism.contact.IntegralPenaltyContact) (in module optimism.contact.MortarContact) compute_normal_from_b() (in module optimism.contact.IntegralPenaltyContact) compute_output_energy_densities_and_fluxes (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_output_energy_densities_and_stresses (optimism.Mechanics.DynamicsFunctions attribute) (optimism.Mechanics.MechanicsFunctions attribute) compute_output_energy_density (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) compute_output_kinetic_energy (optimism.Mechanics.DynamicsFunctions attribute) compute_output_material_qoi (optimism.Mechanics.MechanicsFunctions attribute) compute_output_strain_energy (optimism.Mechanics.DynamicsFunctions attribute) compute_overstress (optimism.material.Hardening.RateSensitivityModel attribute) compute_phase_field_constraint_hessian() (in module optimism.phasefield.PhaseField) compute_phase_potential_density (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) compute_phase_potential_energy (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_potential (optimism.material.Hardening.RateSensitivityModel attribute) compute_projection_dists() (in module optimism.contact.Contact)

compute_projection_dists_smooth() (in module optimism.contact.Contact) compute_q_coordinates() (in module optimism.contact.Contact) compute_q_coordinates_from_field_weights() (in module optimism.contact.Contact) compute_quadrature_point_field_gradient() (in module optimism.FunctionSpace) compute_ray_trace() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) compute_ray_trace_distance_and_location() (in module optimism.contact.EdgeIntersection) compute_residual_norm() (in module optimism.test.MeshFixture) compute_shapes() (in module optimism.Interpolants) compute_smoothing_function() (in module optimism.contact.EdgeIntersection) compute_state_increment() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) compute_state_new (optimism.material.MaterialModel.MaterialModel attribute) (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) compute_state_new() (in module optimism.J2PlasticPhaseField) (in module optimism.material.LinearElastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) compute_state_new_finite_deformations() (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) compute_state_new_seth_hill() (in module optimism.material.J2Plastic) compute_state_new_small_deformations() (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) compute_strain_energy (optimism.Mechanics.MechanicsFunctions attribute) compute_strain_energy_densities (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_strain_energy_density (optimism.phasefield.PhaseFieldMaterialModel.MaterialModel attribute) compute_total_energy() (in module optimism.phasefield.PhaseFieldThresholdPlastic) compute_total_penalty_contact_energy() (in module optimism.contact.PenaltyContact) compute_traction_potential_energy() (in module optimism.Mechanics) (in module optimism.test.test_ReadMesh) compute_traction_potential_energy_on_edge() (in module optimism.test.test_ReadMesh) compute_updated_internal_variables (optimism.Mechanics.DynamicsFunctions attribute) (optimism.Mechanics.MechanicsFunctions attribute) (optimism.phasefield.PhaseField.PhaseFieldFunctions attribute) compute_valid_ray_trace_distance() (in module optimism.contact.EdgeIntersection) compute_valid_ray_trace_distance_smoothed() (in module optimism.contact.EdgeIntersection) conns (optimism.Mesh.Mesh attribute), [1] constant_body_force_potential() (optimism.test.test_Newmark.DynamicsFixture method) constrained_jacobian_p_vec() (optimism.ConstrainedObjective.ConstrainedObjective method) constrained_jacobian_vec() (optimism.ConstrainedObjective.ConstrainedObjective method) constrained_residual() (optimism.ConstrainedObjective.ConstrainedObjective method) ConstrainedObjective (class in optimism.ConstrainedObjective) ConstrainedQuasiObjective (class in optimism.ConstrainedObjective) constraint() (in module optimism.contact.test.test_NewtonGlobalization) (optimism.ConstrainedObjective.ConstrainedObjective method) construct_basis_on_poly() (in module optimism.test.test_PatchTestPou) construct_edge_neighbor_map() (in module optimism.contact.Search) construct_function_space() (in module optimism.FunctionSpace) construct_function_space_from_parent_element() (in module optimism.FunctionSpace) construct_mesh_from_basic_data() (in module optimism.Mesh) construct_quadratic() (in module optimism.NewtonSolver) construct_structured_mesh() (in module optimism.Mesh) construct_weighted_function_space() (in module optimism.FunctionSpace) converged (optimism.ScalarRootFind.SolutionInfo attribute) coordinates (optimism.Interpolants.ParentElement attribute), [1] coords (optimism.Mesh.Mesh attribute), [1] corner() (in module optimism.contact.Levelset) correct (optimism.Mechanics.DynamicsFunctions attribute) correction_norm (optimism.ScalarRootFind.SolutionInfo attribute) cos_of_acos_divided_by_3() (in module optimism.TensorMath) cpp() (in module optimism.contact.EdgeCpp) cpp_distance() (in module optimism.contact.EdgeCpp) cpp_line() (in module optimism.contact.EdgeCpp) create_arch_mesh_disp_and_edges() (optimism.test.MeshFixture.MeshFixture method) create_augmented_lagrangian() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.ConstrainedObjective.ConstrainedQuasiObjective method) create_cos_mesh_disp_and_edges() (optimism.test.MeshFixture.MeshFixture method) create_dynamics_functions() (in module optimism.Mechanics) create_edges() (in module optimism.Mesh) (in module optimism.Surface) create_field() (optimism.FunctionSpace.DofManager method) (optimism.test.test_Newmark.DynamicsFixture method) create_graph() (in module optimism.test.test_PatchTestPou) create_hardening_model() (in module optimism.material.Hardening) create_higher_order_mesh_from_simplex_mesh() (in module optimism.Mesh) create_linear_op() (in module optimism.contact.test.test_NewtonGlobalization) create_material_functions() (in module optimism.material.Gent) create_material_model_functions() (in module optimism.material.HyperViscoelastic) (in module optimism.material.J2Plastic) (in module optimism.material.LinearElastic) (in module optimism.material.MultiBranchHyperViscoelastic) (in module optimism.material.Neohookean) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThreshold) create_mechanics_functions() (in module optimism.Mechanics) create_mesh_and_disp() (optimism.test.MeshFixture.MeshFixture method) create_multi_block_mechanics_functions() (in module optimism.Mechanics) create_nodesets_from_sidesets() (in module optimism.Mesh) create_padded_quadrature_rule_1D() (in module optimism.QuadratureRule) create_partitions() (in module optimism.test.test_PatchTestPou) create_phasefield_functions() (in module optimism.phasefield.PhaseField) create_polys() (optimism.test.test_PatchTestPou.PatchTestQuadraticElements method) create_quadrature_rule_1D() (in module optimism.QuadratureRule) create_quadrature_rule_on_triangle() (in module optimism.QuadratureRule) create_structured_mesh_data() (in module optimism.Mesh) cross() (in module optimism.contact.EdgeCpp) cross2() (in module optimism.contact.EdgeIntersection)

D

data (optimism.VTKWriter.VTKWriter.VTKFieldRecord attribute) dataType (optimism.VTKWriter.VTKWriter.VTKFieldRecord attribute) dConstraint() (in module optimism.contact.test.test_NewtonGlobalization) debug_info (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) default_modify_element_gradient() (in module optimism.FunctionSpace) default_values() (in module optimism.VTKWriter) define_pressure_projection_gradient_tranformation() (in module optimism.Mechanics) degradation() (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThreshold) (in module optimism.phasefield.PhaseFieldThresholdPlastic) degree (optimism.Interpolants.ParentElement attribute), [1] density (optimism.material.MaterialModel.MaterialModel attribute) design_data (optimism.Objective.Params attribute) det() (in module optimism.TensorMath) detpIm1() (in module optimism.TensorMath) dev() (in module optimism.TensorMath) deviator() (in module optimism.TensorMath) df() (in module optimism.test.test_MinimizeScalar)

disable_test_edge_conn() (optimism.test.test_Surface.TestSingleMeshFixture method) dObjective() (in module optimism.contact.test.test_NewtonGlobalization) DofManager (class in optimism.FunctionSpace) DofManagerTest (class in optimism.test.test_DofManager) dofToUnknown (optimism.FunctionSpace.DofManager attribute) dogleg_step() (in module optimism.EquationSolver) dot() (in module optimism.contact.EdgeCpp) (optimism.LU.LU method) dot2() (in module optimism.contact.EdgeIntersection) (in module optimism.Math) DOUBLE (optimism.VTKWriter.VTKDataType attribute) dr() (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) dr_dstrain_and_deqps() (in module optimism.J2PlasticPhaseField) (in module optimism.phasefield.PhaseFieldThresholdPlastic) dynamic_data (optimism.Objective.Params attribute) DynamicPatchTest (class in optimism.test.test_Newmark) DynamicsFixture (class in optimism.test.test_Newmark) DynamicsFunctions (class in optimism.Mechanics)

E

E (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) edges_are_adjacent_non_pacman() (in module optimism.contact.MortarContact) edges_from_points() (in module optimism.contact.test.test_Cpp) eigen_sym33_non_unit() (in module optimism.TensorMath) eigen_sym33_unit() (in module optimism.TensorMath) elastic_deviatoric_free_energy() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThreshold) (in module optimism.phasefield.PhaseFieldThresholdPlastic) elastic_free_energy() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) elastic_volumetric_free_energy() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThreshold) (in module optimism.phasefield.PhaseFieldThresholdPlastic) elementType (optimism.Interpolants.ParentElement attribute), [1] endpoints (optimism.test.test_QuadratureRule.TestQuadratureRules attribute) energy() (in module optimism.test.test_EquationSolver) (in module optimism.test.test_TrustRegionSPG) energy_density() (in module optimism.J2PlasticPhaseField) (in module optimism.phasefield.PhaseFieldThreshold) (in module optimism.phasefield.PhaseFieldThresholdPlastic) (in module optimism.phasefield.test.test_PhaseFieldUniaxial)

energy_density_generic() (in module optimism.J2PlasticPhaseField) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) energy_density_to_lagrangian_density() (in module optimism.phasefield.PhaseField) energyHistory (optimism.material.MaterialUniaxialSimulator.UniaxialOutput attribute), [1] (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) EquationSolverFixture (class in optimism.test.test_EquationSolver) EssentialBC (class in optimism.FunctionSpace) eta1 (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) eta2 (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) eta3 (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) eval_at_iso_points() (in module optimism.QuadratureRule) eval_field() (in module optimism.Surface) eval_linear_field_on_edge() (in module optimism.contact.MortarContact) evaluate_contact_constraints() (in module optimism.contact.PenaltyContact) evaluate_levelset_on_edge() (in module optimism.contact.PenaltyContact) evaluate_on_block() (in module optimism.FunctionSpace) evaluate_on_element() (in module optimism.FunctionSpace)

F

f() (in module optimism.test.ConvexityPlot) (in module optimism.test.test_MinimizeScalar) (in module optimism.test.test_ScalarRootFinder) faceNodes (optimism.Interpolants.ParentElement attribute), [1] factorize() (optimism.SparseCholesky.SparseCholesky method) fieldShape (optimism.FunctionSpace.DofManager attribute) fieldType (optimism.VTKWriter.VTKWriter.VTKFieldRecord attribute) find_generalized_cauchy_point() (in module optimism.TrustRegionSPG)

find_root() (in module optimism.ScalarRootFind) fischer_burmeister() (in module optimism.ConstrainedObjective) (in module optimism.contact.test.test_NewtonGlobalization) fischer_burmeister_jac_l() (in module optimism.ConstrainedObjective) FLOAT (optimism.VTKWriter.VTKDataType attribute) flow_stress() (in module optimism.phasefield.PhaseFieldThresholdPlastic) function_calls (optimism.ScalarRootFind.SolutionInfo attribute) FunctionSpace (class in optimism.FunctionSpace)

G

gamma (optimism.Mechanics.NewmarkParameters attribute) Gc (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) generate_n_random_symmetric_matrices() (in module optimism.test.test_LinAlg) generate_random_points_in_triangle() (in module optimism.test.test_Interpolants) get_bc_size() (optimism.FunctionSpace.DofManager method) get_bc_values() (optimism.FunctionSpace.DofManager method) get_best_neighbor() (in module optimism.contact.Search) get_best_neighbors() (in module optimism.contact.Search) get_best_overlap_vector() (in module optimism.contact.test.test_Search) (in module optimism.contact.test.test_TwoBodyContact) get_blocks() (in module optimism.Mesh) get_closest_distance() (in module optimism.contact.Contact) get_closest_distance_smooth() (in module optimism.contact.Contact) get_closest_neighbors() (in module optimism.contact.MortarContact) get_closest_neighbors_for_self_contact() (in module optimism.contact.MortarContact) get_closest_two_edges() (in module optimism.contact.Contact) get_coords() (in module optimism.Surface) get_coords_and_distances() (in module optimism.contact.Search) get_current_coordinates_at_quadrature_points() (in module optimism.contact.PenaltyContact) get_diagonal_stiffness() (optimism.SparseCholesky.SparseCholesky method) get_edge() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) get_edge_coords() (in module optimism.Mesh) get_edge_field() (in module optimism.Mesh) get_edge_node_indices() (in module optimism.Mesh) get_facet_connectivities() (in module optimism.contact.MortarContact) get_field_index() (in module optimism.Surface) get_lobatto_nodes_1d() (in module optimism.Interpolants) get_multipliers() (optimism.BoundConstrainedObjective.BoundConstrainedObjective method) get_nodal_values_on_edge() (in module optimism.FunctionSpace) get_potential_interaction_list() (in module optimism.contact.Contact)

get_ray() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) get_ray_length_arg_x() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) get_ray_length_arg_y() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) get_residual() (optimism.BoundConstrainedObjective.BoundConstrainedObjective method) (optimism.Objective.ScaledObjective method) get_settings() (in module optimism.AlSolver) (in module optimism.EquationSolver) (in module optimism.MinimizeScalar) (in module optimism.ScalarRootFind) (in module optimism.TrustRegionSPG) get_side_coordinates() (in module optimism.contact.Contact) get_side_set_segments() (in module optimism.contact.test.test_TwoBodyContact) get_total_residual() (optimism.BoundConstrainedObjective.BoundConstrainedObjective method) get_ubcs() (optimism.test.test_Newmark.DynamicsFixture method) get_unknown_size() (optimism.FunctionSpace.DofManager method) get_unknown_values() (optimism.FunctionSpace.DofManager method) get_value() (optimism.BoundConstrainedObjective.BoundConstrainedObjective method) (optimism.Objective.ScaledObjective method) globalized_newton_step() (in module optimism.NewtonSolver) gradient() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.Objective.Objective method) gradient_2D_to_axisymmetric() (in module optimism.TensorMath) gradient_and_tangent() (optimism.Objective.Objective method) gradient_l() (optimism.ConstrainedObjective.ConstrainedObjective method) gradient_p() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.Objective.Objective method) gradients (optimism.Interpolants.ShapeFunctions attribute), [1] GradOfPlasticityModelFixture (class in optimism.material.test.test_J2Plastic) GradOfPlasticPhaseFieldModelFixture (class in optimism.phasefield.test.test_PhaseFieldLorentzPlastic) (class in optimism.phasefield.test.test_PhaseFieldThresholdPlastic) green_lagrange_strain() (in module optimism.material.LinearElastic)

H

H (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) hardening_energy_density() (in module optimism.J2PlasticPhaseField) (in module optimism.phasefield.PhaseFieldThresholdPlastic) HardeningModel (class in optimism.material.Hardening) HessColCoords (optimism.FunctionSpace.DofManager attribute) hessian() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.Objective.Objective method) hessian_bc_mask (optimism.FunctionSpace.DofManager attribute)

hessian_vec() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.Objective.Objective method) hessrayleigh() (in module optimism.JaxConfig) HessRowCoords (optimism.FunctionSpace.DofManager attribute) hessvec() (in module optimism.JaxConfig) HyperViscoModelFixture (class in optimism.material.test.test_HyperVisco) (class in optimism.material.test.test_MultiBranchHyperVisco) HyperViscoUniaxialStrain (class in optimism.material.test.test_HyperVisco) (class in optimism.material.test.test_MultiBranchHyperVisco)

I

I2() (in module optimism.TensorMath) ids (optimism.FunctionSpace.DofManager attribute) if_then_else() (in module optimism.JaxConfig) incremental_potential() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) initial_state() (in module optimism.phasefield.PhaseFieldThreshold) initialize() (optimism.BoundConstrainedObjective.ScaledPrecondStrategy method) (optimism.ConstrainedObjective.PrecondStrategy method) (optimism.Objective.PrecondStrategy method) (optimism.Objective.ScaledPrecondStrategy method) (optimism.Objective.TwoTryPrecondStrategy method) insort() (in module optimism.test.test_PatchTestPou) INT (optimism.VTKWriter.VTKDataType attribute) integral() (in module optimism.contact.test.test_IntegralPenaltyContact) integrate_2D_monomial_on_triangle() (in module optimism.test.test_QuadratureRule) integrate_element() (in module optimism.FunctionSpace) integrate_element_from_local_field() (in module optimism.FunctionSpace) integrate_function() (in module optimism.Surface) integrate_function_on_edge() (in module optimism.FunctionSpace) (in module optimism.Surface) integrate_function_on_edges() (in module optimism.FunctionSpace) integrate_function_on_surface() (in module optimism.Surface) integrate_gap() (in module optimism.contact.IntegralPenaltyContact) integrate_gap_numeric() (in module optimism.contact.test.test_IntegralPenaltyContact) integrate_monomial_on_line() (in module optimism.test.test_QuadratureRule) integrate_mortar_barrier() (in module optimism.contact.IntegralPenaltyContact) integrate_normalized_gap() (in module optimism.contact.IntegralPenaltyContact)

integrate_over_block() (in module optimism.FunctionSpace) integrate_values() (in module optimism.Surface) integrate_with_active_mortar() (in module optimism.contact.MortarContact) integrate_with_mortar() (in module optimism.contact.MortarContact) integrated_material_qoi (optimism.Mechanics.MechanicsFunctions attribute) interiorNodes (optimism.Interpolants.ParentElement attribute), [1] internalVariableHistory (optimism.material.MaterialUniaxialSimulator.UniaxialOutput attribute), [1] (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) interpolate_element_kinematics() (in module optimism.phasefield.PhaseFieldThresholdPlastic) interpolate_kinematics() (in module optimism.phasefield.PhaseFieldThresholdPlastic) interpolate_nodal_field_on_edge() (in module optimism.FunctionSpace) (in module optimism.test.test_ReadMesh) interpolate_to_element_points() (in module optimism.FunctionSpace) interpolate_to_point() (in module optimism.FunctionSpace) interpolate_to_points() (in module optimism.FunctionSpace) inv() (in module optimism.TensorMath) inverse_ncp_hessian_bound (optimism.AlSolver.Settings attribute) is_contact_edge() (optimism.contact.test.test_Search.TestDoubleMeshFixture method) is_converged() (in module optimism.EquationSolver) (in module optimism.TrustRegionSPG) is_initialized() (optimism.EquationSolverSubspace.ModelProblem method) is_inside_triangle() (in module optimism.test.test_QuadratureRule) is_integration_edge() (optimism.contact.test.test_Search.TestDoubleMeshFixture method) is_on_boundary() (in module optimism.EquationSolver) (in module optimism.TrustRegionSPG) isAxisymmetric (optimism.FunctionSpace.FunctionSpace attribute), [1] isBc (optimism.FunctionSpace.DofManager attribute) isUnknown (optimism.FunctionSpace.DofManager attribute) iterations (optimism.ScalarRootFind.SolutionInfo attribute)

J

J2PlasticUniaxial (class in optimism.material.test.test_J2Plastic) J2UpdateFixture (class in optimism.material.test.test_J2Plastic) jacobian_l_vec() (optimism.ConstrainedObjective.ConstrainedObjective method)

jacobian_p2_vec() (optimism.Objective.Objective method) jacobian_p_vec() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.Objective.Objective method) jvp_sqrtm() (in module optimism.LinAlg)

K

kappa (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute)

kinetic_energy_density() (in module optimism.Mechanics) kirchhoffStressHistory (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) kouri_exact_line_search() (in module optimism.TrustRegionSPG)

L

l (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) line_search_backtrack() (in module optimism.MinimizeScalar) line_search_bidirectional() (in module optimism.MinimizeScalar) line_search_forwardtrack() (in module optimism.MinimizeScalar) linear() (in module optimism.material.Hardening) linear_op() (in module optimism.contact.test.test_NewtonGlobalization) linear_strain() (in module optimism.material.LinearElastic) linear_update() (in module optimism.AlSolver)

LinearPatchTestLinearElements (class in optimism.test.test_PatchTest) LinearPatchTestQuadraticElements (class in optimism.test.test_PatchTest) log_pade_pf() (in module optimism.LinAlg) log_sqrt_symm() (in module optimism.TensorMath) log_strain() (in module optimism.material.LinearElastic) logger() (optimism.Timer.Timer method) logm_jvp() (in module optimism.LinAlg) LONG (optimism.VTKWriter.VTKDataType attribute) LU (class in optimism.LU)

M

make_disp_grad_from_strain() (in module optimism.material.test.test_J2Plastic) make_high_order_writer_with_fields() (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder method) make_initial_state() (in module optimism.J2PlasticPhaseField) (in module optimism.material.Gent) (in module optimism.material.LinearElastic) (in module optimism.material.Neohookean) (in module optimism.phasefield.PhaseFieldThresholdPlastic) make_initial_state_finite_deformations() (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) make_initial_state_small_deformations() (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) make_parent_element_1d() (in module optimism.Interpolants) make_parent_element_2d() (in module optimism.Interpolants) make_parent_element_2d_with_bubble() (in module optimism.Interpolants) make_parent_elements() (in module optimism.Interpolants) make_properties() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThreshold) (in module optimism.phasefield.PhaseFieldThresholdPlastic) makeKinematics() (optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator static method) makeStrainTensor_() (in module optimism.material.MaterialUniaxialSimulator) map_1d_jac() (in module optimism.test.test_QuadratureRule) map_affine_1D() (in module optimism.test.test_QuadratureRule) map_element_shape_grads() (in module optimism.FunctionSpace) map_to_arch() (in module optimism.test.MeshFixture) map_to_cos() (in module optimism.test.MeshFixture) MaterialModel (class in optimism.material.MaterialModel) (class in optimism.phasefield.PhaseFieldMaterialModel) MaterialPointSimulator (class in optimism.phasefield.MaterialPointSimulator) MaterialUniaxialSimulatorFixture (class in optimism.material.test.test_MaterialUniaxialSimulator) MatProps (class in optimism.material.MaterialModel) max() (in module optimism.SmoothFunctions) max_al_iters (optimism.AlSolver.Settings attribute) max_cg_iters (optimism.EquationSolver.Settings attribute) max_cumulative_cg_iters (optimism.EquationSolver.Settings attribute) max_cumulative_spg_iters (optimism.TrustRegionSPG.Settings attribute) max_degree_1D (optimism.test.test_QuadratureRule.TestQuadratureRules attribute) max_degree_2D (optimism.test.test_QuadratureRule.TestQuadratureRules attribute) max_gmres_iters (optimism.AlSolver.Settings attribute) (optimism.NewtonSolver.Settings attribute) max_iters (optimism.MinimizeScalar.Settings attribute) (optimism.ScalarRootFind.Settings attribute) max_spectral_step_length (optimism.TrustRegionSPG.Settings attribute) max_spg_iters (optimism.TrustRegionSPG.Settings attribute) max_trust_iters (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) MechanicsFunctions (class in optimism.Mechanics) MechanicsFunctionsFixture (class in optimism.test.test_Mechanics) Mesh (class in optimism.Mesh) mesh (optimism.FunctionSpace.FunctionSpace attribute), [1] mesh_with_blocks() (in module optimism.Mesh) mesh_with_coords() (in module optimism.Mesh) mesh_with_nodesets() (in module optimism.Mesh) MeshFixture (class in optimism.test.MeshFixture) min() (in module optimism.SmoothFunctions) min_base() (in module optimism.SmoothFunctions) min_dist_squared() (in module optimism.contact.Contact) min_distance_squared() (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) min_spectral_step_length (optimism.TrustRegionSPG.Settings attribute) min_tr_size (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) minimize_scalar() (in module optimism.MinimizeScalar) minimum_squared_distance() (in module optimism.contact.MortarContact) mises_invariant() (in module optimism.TensorMath) ModelProblem (class in optimism.EquationSolverSubspace) module optimism optimism.AlSolver optimism.BoundConstrainedObjective optimism.BoundConstrainedSolver optimism.ConstrainedObjective optimism.contact optimism.contact.Contact optimism.contact.EdgeCpp optimism.contact.EdgeIntersection optimism.contact.Friction optimism.contact.IntegralPenaltyContact optimism.contact.Levelset optimism.contact.LevelsetConstraint optimism.contact.MortarContact optimism.contact.PenaltyContact optimism.contact.Search optimism.contact.test optimism.contact.test.SlidePlot optimism.contact.test.test_Contact optimism.contact.test.test_Cpp optimism.contact.test.test_EdgeIntersection optimism.contact.test.test_IntegralPenaltyContact optimism.contact.test.test_LevelsetConstraint optimism.contact.test.test_MortarGeom optimism.contact.test.test_NeighborSearch optimism.contact.test.test_NewtonGlobalization optimism.contact.test.test_Search optimism.contact.test.test_TwoBodyContact optimism.contact.test.test_TwoBodyMortarContact optimism.EquationSolver optimism.EquationSolverSubspace optimism.FunctionSpace optimism.Interpolants optimism.J2PlasticPhaseField optimism.JaxConfig optimism.LinAlg optimism.LU optimism.material optimism.material.Gent optimism.material.Hardening optimism.material.HyperViscoelastic optimism.material.J2Plastic optimism.material.LinearElastic optimism.material.MaterialModel optimism.material.MaterialUniaxialSimulator optimism.material.MultiBranchHyperViscoelastic optimism.material.Neohookean optimism.material.test optimism.material.test.test_Gent optimism.material.test.test_Hardening optimism.material.test.test_HyperVisco optimism.material.test.test_J2Plastic optimism.material.test.test_LinearElastic optimism.material.test.test_MaterialUniaxialSimulator optimism.material.test.test_MultiBranchHyperVisco optimism.material.test.test_RateSensitivity optimism.Math optimism.Mechanics optimism.Mesh optimism.MeshPlot optimism.MinimizeScalar optimism.NewtonSolver optimism.Objective optimism.phasefield optimism.phasefield.MaterialPointSimulator optimism.phasefield.PhaseField optimism.phasefield.PhaseFieldLorentzPlastic optimism.phasefield.PhaseFieldMaterialModel optimism.phasefield.PhaseFieldThreshold optimism.phasefield.PhaseFieldThresholdPlastic optimism.phasefield.test optimism.phasefield.test.plotPhaseFieldThresholdModel optimism.phasefield.test.test_PhaseFieldLorentzPlastic optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch optimism.phasefield.test.test_PhaseFieldThreshold optimism.phasefield.test.test_PhaseFieldThresholdPatch optimism.phasefield.test.test_PhaseFieldThresholdPlastic optimism.phasefield.test.test_PhaseFieldUniaxial optimism.QuadratureRule optimism.ReadExodusMesh optimism.ReadMesh optimism.ScalarRootFind optimism.SmoothFunctions optimism.SparseCholesky optimism.SparseMatrixAssembler optimism.Surface optimism.TensorMath optimism.test optimism.test.ConvexityPlot optimism.test.MeshFixture optimism.test.test_AxisymmPatchTest optimism.test.test_DofManager optimism.test.test_EquationSolver optimism.test.test_FunctionSpace optimism.test.test_Interpolants optimism.test.test_JaxConfig optimism.test.test_LinAlg optimism.test.test_Math optimism.test.test_Mechanics optimism.test.test_Mesh optimism.test.test_MinimizeScalar optimism.test.test_Newmark optimism.test.test_Objective optimism.test.test_PatchTest optimism.test.test_PatchTestPou optimism.test.test_QuadratureRule optimism.test.test_ReadExodusMesh optimism.test.test_ReadMesh optimism.test.test_ScalarRootFinder optimism.test.test_SmoothFunctions optimism.test.test_SparseMatrix optimism.test.test_SparsePreconditioner optimism.test.test_Surface optimism.test.test_TensorMath optimism.test.test_Traction optimism.test.test_TrustRegionSPG optimism.test.test_VolumeAverageJ optimism.test.test_VTKWriter optimism.test.TestFixture optimism.Timer optimism.TrustRegionSPG optimism.VTKWriter optimism.WarmStart

mu (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) multiply_by_approx_hessian() (optimism.Objective.Objective method) multiply_by_approximate() (optimism.SparseCholesky.SparseCholesky method) multiply_by_transpose() (optimism.LU.LU method) (optimism.SparseCholesky.SparseCholesky method) my_func() (in module optimism.contact.test.test_NewtonGlobalization)

N

name (optimism.Timer.Timer attribute) ncp() (optimism.ConstrainedObjective.ConstrainedObjective method) ncp_hessian() (optimism.ConstrainedObjective.ConstrainedObjective method) NewmarkParameters (class in optimism.Mechanics) newton() (in module optimism.EquationSolver) newton_solve() (in module optimism.EquationSolver) newton_step() (in module optimism.NewtonSolver) (in module optimism.ScalarRootFind) no_test_cgunbound() (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture method) no_test_hessian() (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock method) no_test_plastic_strain_path() (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture method) no_test_plot_high_order_nodes() (optimism.test.test_Interpolants.TestInterpolants method) no_test_plot_shape_functions() (optimism.test.test_Interpolants.TestBubbleInterpolants method) no_test_steihaug_on_rosenbrock() (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock method) no_test_trust_region_equation_solver() (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) no_test_uniaxial() (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture method) nodeSet (optimism.FunctionSpace.EssentialBC attribute) nodeSets (optimism.Mesh.Mesh attribute), [1]

nonlinear_equation_solve() (in module optimism.EquationSolver) nonmonotone_line_search() (in module optimism.TrustRegionSPG) norm() (in module optimism.TensorMath) norm_of_deviator() (in module optimism.TensorMath) norm_of_deviator_squared() (in module optimism.TensorMath) norm_squared() (in module optimism.contact.EdgeCpp) normals_are_facing() (in module optimism.contact.MortarContact) notest_grad() (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture method) notest_jit() (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture method) notest_stiff_problem() (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture method) nu (optimism.phasefield.PhaseFieldThreshold.Properties attribute) (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute) num_elements() (in module optimism.Mesh) num_initial_low_order_iterations (optimism.AlSolver.Settings attribute) num_nodes (optimism.Interpolants.ParentElement property) num_nodes() (in module optimism.Mesh) num_props (optimism.material.MaterialModel.MatProps attribute) num_states (optimism.material.MaterialModel.MatProps attribute) numerical_grad() (in module optimism.test.test_TensorMath)

O

Objective (class in optimism.Objective) objective() (in module optimism.contact.test.test_NewtonGlobalization) optimism module optimism.AlSolver module optimism.BoundConstrainedObjective module optimism.BoundConstrainedSolver module optimism.ConstrainedObjective module optimism.contact module optimism.contact.Contact module optimism.contact.EdgeCpp module optimism.contact.EdgeIntersection module optimism.contact.Friction module optimism.contact.IntegralPenaltyContact module optimism.contact.Levelset module optimism.contact.LevelsetConstraint module optimism.contact.MortarContact module optimism.contact.PenaltyContact module optimism.contact.Search module optimism.contact.test module optimism.contact.test.SlidePlot module optimism.contact.test.test_Contact module optimism.contact.test.test_Cpp module optimism.contact.test.test_EdgeIntersection module optimism.contact.test.test_IntegralPenaltyContact module optimism.contact.test.test_LevelsetConstraint module optimism.contact.test.test_MortarGeom module optimism.contact.test.test_NeighborSearch module optimism.contact.test.test_NewtonGlobalization module optimism.contact.test.test_Search module optimism.contact.test.test_TwoBodyContact module optimism.contact.test.test_TwoBodyMortarContact module optimism.EquationSolver module optimism.EquationSolverSubspace module optimism.FunctionSpace module optimism.Interpolants module optimism.J2PlasticPhaseField module optimism.JaxConfig module optimism.LinAlg module optimism.LU module optimism.material module optimism.material.Gent module optimism.material.Hardening module optimism.material.HyperViscoelastic module optimism.material.J2Plastic module optimism.material.LinearElastic module optimism.material.MaterialModel module optimism.material.MaterialUniaxialSimulator module optimism.material.MultiBranchHyperViscoelastic module optimism.material.Neohookean module optimism.material.test module optimism.material.test.test_Gent module optimism.material.test.test_Hardening module optimism.material.test.test_HyperVisco module optimism.material.test.test_J2Plastic module optimism.material.test.test_LinearElastic module optimism.material.test.test_MaterialUniaxialSimulator module optimism.material.test.test_MultiBranchHyperVisco module optimism.material.test.test_RateSensitivity module optimism.Math module optimism.Mechanics module optimism.Mesh module optimism.MeshPlot module optimism.MinimizeScalar module optimism.NewtonSolver module

optimism.Objective module optimism.phasefield module optimism.phasefield.MaterialPointSimulator module optimism.phasefield.PhaseField module optimism.phasefield.PhaseFieldLorentzPlastic module optimism.phasefield.PhaseFieldMaterialModel module optimism.phasefield.PhaseFieldThreshold module optimism.phasefield.PhaseFieldThresholdPlastic module optimism.phasefield.test module optimism.phasefield.test.plotPhaseFieldThresholdModel module optimism.phasefield.test.test_PhaseFieldLorentzPlastic module optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch module optimism.phasefield.test.test_PhaseFieldThreshold module optimism.phasefield.test.test_PhaseFieldThresholdPatch module optimism.phasefield.test.test_PhaseFieldThresholdPlastic module optimism.phasefield.test.test_PhaseFieldUniaxial module optimism.QuadratureRule module optimism.ReadExodusMesh module optimism.ReadMesh module optimism.ScalarRootFind module optimism.SmoothFunctions module optimism.SparseCholesky module optimism.SparseMatrixAssembler module optimism.Surface module optimism.TensorMath module optimism.test module optimism.test.ConvexityPlot module optimism.test.MeshFixture module optimism.test.test_AxisymmPatchTest module optimism.test.test_DofManager module optimism.test.test_EquationSolver module optimism.test.test_FunctionSpace module optimism.test.test_Interpolants module optimism.test.test_JaxConfig module optimism.test.test_LinAlg module optimism.test.test_Math module optimism.test.test_Mechanics module optimism.test.test_Mesh module optimism.test.test_MinimizeScalar module optimism.test.test_Newmark module optimism.test.test_Objective module optimism.test.test_PatchTest module optimism.test.test_PatchTestPou module optimism.test.test_QuadratureRule module optimism.test.test_ReadExodusMesh module optimism.test.test_ReadMesh module optimism.test.test_ScalarRootFinder module optimism.test.test_SmoothFunctions module optimism.test.test_SparseMatrix module optimism.test.test_SparsePreconditioner module optimism.test.test_Surface module optimism.test.test_TensorMath module optimism.test.test_Traction module optimism.test.test_TrustRegionSPG module optimism.test.test_VolumeAverageJ module optimism.test.test_VTKWriter module optimism.test.TestFixture module optimism.Timer module optimism.TrustRegionSPG module optimism.VTKWriter module optimism.WarmStart module output_matrix() (in module optimism.EquationSolver) (in module optimism.TrustRegionSPG) over_iters (optimism.EquationSolver.Settings attribute)

P

param_index_update() (in module optimism.Objective) ParameterizationTestSuite (class in optimism.test.test_FunctionSpace) Params (class in optimism.Objective) (in module optimism.contact.Friction) ParentElement (class in optimism.Interpolants) parentElement (optimism.Mesh.Mesh attribute), [1] parentElement1d (optimism.Mesh.Mesh attribute), [1] parse_2D_to_3D_gradient_transformation() (in module optimism.Mechanics) pascal_triangle_monomials() (in module optimism.Interpolants) PatchTestQuadraticElements (class in optimism.test.test_PatchTestPou) penalty_scaling (optimism.AlSolver.Settings attribute) phase_potential_density() (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThreshold) (in module optimism.phasefield.PhaseFieldThresholdPlastic) PhaseFieldFunctions (class in optimism.phasefield.PhaseField) PhaseFieldThresholdModelFixture (class in optimism.phasefield.test.test_PhaseFieldThreshold) PhaseFieldThresholdUniaxialFixture (class in optimism.phasefield.test.plotPhaseFieldThresholdModel) PhaseFieldUniaxialFixture (class in optimism.phasefield.test.test_PhaseFieldUniaxial) phaseHistory (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) plane() (in module optimism.contact.Levelset) plane_strain_element_gradient_transformation() (in module optimism.phasefield.PhaseField) plane_strain_gradient() (in module optimism.phasefield.PhaseField) plane_strain_gradient_transformation() (in module optimism.Mechanics) PlasticityOnMesh (class in optimism.material.test.test_J2Plastic) plot() (optimism.contact.test.SlidePlot.slide_plot method) plot_grid() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) plot_mesh() (in module optimism.MeshPlot) plot_mesh_with_field() (in module optimism.MeshPlot)

plot_solution() (optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture method) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture method) power_law() (in module optimism.material.Hardening) power_law_rate_sensitivity() (in module optimism.material.Hardening) PowerLawHardeningTestFixture (class in optimism.material.test.test_Hardening) precise_integral() (in module optimism.contact.test.test_IntegralPenaltyContact) precond_at_attempt() (optimism.BoundConstrainedObjective.ScaledPrecondStrategy method) (optimism.ConstrainedObjective.PrecondStrategy method) (optimism.Objective.PrecondStrategy method) (optimism.Objective.ScaledPrecondStrategy method) (optimism.Objective.TwoTryPrecondStrategy method) precond_update_func() (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture method) preconditioned_project_to_boundary() (in module optimism.EquationSolver) PrecondStrategy (class in optimism.ConstrainedObjective) (class in optimism.Objective) predict (optimism.Mechanics.DynamicsFunctions attribute) print_banner() (in module optimism.EquationSolver) print_min_banner() (in module optimism.EquationSolver) (in module optimism.TrustRegionSPG) project() (in module optimism.TrustRegionSPG) project_onto_tr() (in module optimism.TrustRegionSPG) project_quadrature_field_to_element_field() (in module optimism.FunctionSpace) project_to_boundary() (in module optimism.EquationSolver) project_to_boundary_with_coefs() (in module optimism.EquationSolver) (in module optimism.EquationSolverSubspace) Properties (class in optimism.phasefield.PhaseFieldThreshold) (class in optimism.phasefield.PhaseFieldThresholdPlastic) props (optimism.material.MaterialModel.MatProps attribute)

Q

quadratic() (in module optimism.test.test_TrustRegionSPG) QuadraticPatchTestQuadraticElements (class in optimism.test.test_PatchTest)

QuadratureRule (class in optimism.QuadratureRule) quadratureRule (optimism.FunctionSpace.FunctionSpace attribute), [1]

R

r() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) r_and_deqps() (in module optimism.J2PlasticPhaseField) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) r_tol (optimism.ScalarRootFind.Settings attribute) RateSensitivityFixture (class in optimism.material.test.test_RateSensitivity) RateSensitivityModel (class in optimism.material.Hardening) RateSentivityInsideJ2 (class in optimism.material.test.test_RateSensitivity) read_exodus_mesh() (in module optimism.ReadExodusMesh)

read_exodus_mesh_element_properties() (in module optimism.ReadExodusMesh) read_json_mesh() (in module optimism.ReadMesh) relative_gmres_tol (optimism.AlSolver.Settings attribute) (optimism.NewtonSolver.Settings attribute) reset_kappa() (optimism.ConstrainedObjective.ConstrainedObjective method) residual() (in module optimism.contact.test.test_NewtonGlobalization) residual_norm (optimism.ScalarRootFind.SolutionInfo attribute) right_polar_decomposition() (in module optimism.TensorMath) rosenbrock() (in module optimism.test.test_TrustRegionSPG) rtsafe_() (in module optimism.ScalarRootFind) run() (in module optimism.material.MaterialUniaxialSimulator) (optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator method)

S

safe_sqrt_jvp() (in module optimism.Math) ScalarRootFindTestFixture (class in optimism.test.test_ScalarRootFinder) SCALARS (optimism.VTKWriter.VTKFieldType attribute) ScaledObjective (class in optimism.Objective) ScaledPrecondStrategy (class in optimism.BoundConstrainedObjective) (class in optimism.Objective) SelfContactPenaltyFixture (class in optimism.contact.test.test_NeighborSearch) set_initial_conditions() (optimism.test.test_Newmark.DynamicsFixture method) Settings (class in optimism.AlSolver) (class in optimism.EquationSolver) (class in optimism.MinimizeScalar) (class in optimism.NewtonSolver) (class in optimism.ScalarRootFind) (class in optimism.TrustRegionSPG) settings_with_new_tol() (in module optimism.EquationSolver) (in module optimism.TrustRegionSPG) setUp() (optimism.contact.test.test_Contact.TestContactFrictionData method) (optimism.contact.test.test_Cpp.TestEdgeIntersection method) (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) (optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint method) (optimism.contact.test.test_MortarGeom.TestMortarGeom method) (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) (optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver method) (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) (optimism.contact.test.test_Search.TestDoubleMeshFixture method) (optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture method) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture method) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodySelfContactFixture method) (optimism.material.test.test_Gent.TestGentMaterial method) (optimism.material.test.test_Hardening.PowerLawHardeningTestFixture method) (optimism.material.test.test_Hardening.VoceHardeningTestFixture method) (optimism.material.test.test_HyperVisco.HyperViscoModelFixture method) (optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture method) (optimism.material.test.test_J2Plastic.J2PlasticUniaxial method) (optimism.material.test.test_J2Plastic.J2UpdateFixture method) (optimism.material.test.test_LinearElastic.TestLinearElasticMaterial method) (optimism.material.test.test_MultiBranchHyperVisco.HyperViscoModelFixture method) (optimism.phasefield.test.plotPhaseFieldThresholdModel.PhaseFieldThresholdUniaxialFixture method) (optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture method) (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture method) (optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPatch.TestSingleMeshFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture method) (optimism.test.test_AxisymmPatchTest.AxisymmPatchTest method) (optimism.test.test_DofManager.DofManagerTest method) (optimism.test.test_EquationSolver.EquationSolverFixture method) (optimism.test.test_FunctionSpace.ParameterizationTestSuite method) (optimism.test.test_FunctionSpace.TestFunctionSpaceFixture method) (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) (optimism.test.test_FunctionSpace.TestFunctionSpaceSingleQuadPointFixture method) (optimism.test.test_Interpolants.TestBubbleInterpolants method) (optimism.test.test_Interpolants.TestInterpolants method) (optimism.test.test_LinAlg.TestLinAlg method) (optimism.test.test_Math.TestMathInnerProduct method) (optimism.test.test_Math.TestMathSum method) (optimism.test.test_Mechanics.MechanicsFunctionsFixture method) (optimism.test.test_Mesh.TestSingleMeshFixture method) (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture method) (optimism.test.test_Newmark.DynamicPatchTest method) (optimism.test.test_Newmark.DynamicsFixture method) (optimism.test.test_PatchTest.LinearPatchTestLinearElements method) (optimism.test.test_PatchTest.LinearPatchTestQuadraticElements method) (optimism.test.test_PatchTest.QuadraticPatchTestQuadraticElements method) (optimism.test.test_PatchTestPou.PatchTestQuadraticElements method) (optimism.test.test_ReadExodusMesh.TestMeshReadData method) (optimism.test.test_ReadExodusMesh.TestMeshReadPatchTest method) (optimism.test.test_ReadExodusMesh.TestMeshReadPropertiesTest method) (optimism.test.test_ReadMesh.TestMeshReadData method) (optimism.test.test_ReadMesh.TestMeshReadPatchTest method) (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) (optimism.test.test_SparseMatrix.SparsePatchFixture method) (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture method) (optimism.test.test_Surface.TestSingleMeshFixture method) (optimism.test.test_TensorMath.TensorMathFixture method) (optimism.test.test_Traction.TractionPatch method) (optimism.test.test_TrustRegionSPG.TestProjectionOnBoundary method) (optimism.test.test_TrustRegionSPG.TestSubproblemSolveFixture method) (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture method) (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock method) (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) (optimism.test.test_VolumeAverageJ.TestVolumeAverage method) (optimism.test.test_VTKWriter.TestVTKWriter method) (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder method)

setup_system() (optimism.EquationSolverSubspace.ModelProblem method) shape1d() (in module optimism.Interpolants) shape2d() (in module optimism.Interpolants) shape2dBubble() (in module optimism.Interpolants) ShapeFunctions (class in optimism.Interpolants) shapeGrads (optimism.FunctionSpace.FunctionSpace attribute), [1] shapes (optimism.FunctionSpace.FunctionSpace attribute), [1] SHORT (optimism.VTKWriter.VTKDataType attribute) show() (optimism.contact.test.SlidePlot.slide_plot method) sideSets (optimism.Mesh.Mesh attribute), [1] simplexNodesOrdinals (optimism.Mesh.Mesh attribute), [1] skw() (in module optimism.TensorMath) slice_unknowns_with_dof_indices() (optimism.FunctionSpace.DofManager method) slide_plot (class in optimism.contact.test.SlidePlot) smooth_distance() (in module optimism.contact.EdgeCpp) smooth_heaviside_at_zero() (in module optimism.contact.IntegralPenaltyContact) smooth_linear() (in module optimism.contact.IntegralPenaltyContact) (in module optimism.contact.MortarContact) smoothstep() (in module optimism.contact.EdgeCpp) SolutionInfo (class in optimism.ScalarRootFind) solve() (in module optimism.TrustRegionSPG) (optimism.EquationSolverSubspace.ModelProblem method) (optimism.LU.LU method) solve_spg_subproblem() (in module optimism.TrustRegionSPG) solve_sub_step() (in module optimism.AlSolver) solve_transpose() (optimism.LU.LU method) solve_trust_region_equality_constraint() (in module optimism.EquationSolver) solve_trust_region_minimization() (in module optimism.EquationSolver) sort_uniq() (in module optimism.contact.test.test_Contact) SparseCholesky (class in optimism.SparseCholesky) SparseCholeskyFixture (class in optimism.test.test_SparsePreconditioner) SparsePatchFixture (class in optimism.test.test_SparseMatrix) spectral_gradient_minimize() (in module optimism.EquationSolverSubspace) spg_inexact_solve_ratio (optimism.TrustRegionSPG.Settings attribute) spg_nonmonotone_iter_limit_to_enforce_decrease (optimism.TrustRegionSPG.Settings attribute) spg_tol (optimism.TrustRegionSPG.Settings attribute) spg_use_nonmonotone (optimism.TrustRegionSPG.Settings attribute) sphere() (in module optimism.contact.Levelset) spline_ramp() (in module optimism.contact.test.test_MortarGeom) sqrtm_dbp() (in module optimism.LinAlg) start() (optimism.Timer.Timer method) state_data (optimism.Objective.Params attribute) state_new() (in module optimism.phasefield.PhaseFieldThreshold) stop() (optimism.Timer.Timer method) strain_energy_density() (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThreshold) (in module optimism.phasefield.PhaseFieldThresholdPlastic) strain_energy_density_to_lagrangian_density() (in module optimism.Mechanics) strainHistory (optimism.material.MaterialUniaxialSimulator.UniaxialOutput attribute), [1] (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) stressHistory (optimism.material.MaterialUniaxialSimulator.UniaxialOutput attribute), [1] (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) subproblem_optimality() (in module optimism.TrustRegionSPG) sum2() (in module optimism.Math) sym() (in module optimism.TensorMath) symmetric_matrix_function() (in module optimism.TensorMath)

T

t1 (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) t2 (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) target_constraint_decrease_factor (optimism.AlSolver.Settings attribute) taylor_integral() (in module optimism.contact.test.test_IntegralPenaltyContact) tearDown() (optimism.test.test_VTKWriter.TestVTKWriter method) (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder method) tensor_2D_to_3D() (in module optimism.TensorMath) TensorMathFixture (class in optimism.test.test_TensorMath) TENSORS (optimism.VTKWriter.VTKFieldType attribute) test_1D_element_element_topological_nodesets() (optimism.test.test_Interpolants.TestInterpolants method) test_1D_interpolant_points_in_element() (optimism.test.test_Interpolants.TestInterpolants method) test_1D_quadrature_exactness() (optimism.test.test_QuadratureRule.TestQuadratureRules method) test_1D_quadrature_points_in_domain() (optimism.test.test_QuadratureRule.TestQuadratureRules method) test_1D_quadrature_weight_positivity() (optimism.test.test_QuadratureRule.TestQuadratureRules method) test_al_solver() (optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver method) test_all_sets_named() (optimism.test.test_ReadExodusMesh.TestMeshReadData method) (optimism.test.test_ReadMesh.TestMeshReadData method) test_axisymmetric_gradient() (optimism.test.test_AxisymmPatchTest.AxisymmPatchTest method) test_bad_property_names() (optimism.test.test_ReadExodusMesh.TestMeshReadPropertiesTest method) test_block_maps() (optimism.test.test_ReadExodusMesh.TestMeshReadData method) test_block_maps_no_map() (optimism.test.test_ReadExodusMesh.TestMeshReadData method) test_bubble_grad_interpolation() (optimism.test.test_Interpolants.TestBubbleInterpolants method) test_bubble_interpolation() (optimism.test.test_Interpolants.TestBubbleInterpolants method) test_cauchy_point_obeys_constraints() (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) test_cauchy_point_stays_inside_trust_region() (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) test_cauchy_point_with_active_constraints_achieves_sufficient_decrease() (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) test_combining_nodesets() (optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture method) test_combining_sidesets() (optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture method) test_compute_all_positive_constraints_for_far_away_levelset() (optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint method) test_compute_kinetic_energy() (optimism.test.test_Newmark.DynamicsFixture method) test_constant() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) test_constant_J_projection_exact_for_constant_J_field() (optimism.test.test_VolumeAverageJ.TestVolumeAverage method) test_constant_J_projection_inexact_for_linear_J_field() (optimism.test.test_VolumeAverageJ.TestVolumeAverage method) test_constrained_hessian() (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPatch.TestSingleMeshFixture method) test_contact_constraints() (optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture method) test_contact_distance_constraint_evaluation() (optimism.contact.test.test_Search.TestDoubleMeshFixture method) test_contact_search() (optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture method) (optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture method) test_conversion_to_quadratic_mesh_is_valid() (optimism.test.test_Mesh.TestSingleMeshFixture method) test_correct_number_of_edges_created_for_contact() (optimism.contact.test.test_Search.TestDoubleMeshFixture method) test_correspondence_with_linear_elasticity() (optimism.material.test.test_Gent.TestGentMaterial method) test_cpp_dist_corner1() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_cpp_dist_corner2() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_cpp_dist_exterior() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_cpp_dist_interior() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_create_nodesets_from_sidesets() (optimism.test.test_Mesh.TestSingleMeshFixture method) test_debug_infs_is_off() (optimism.test.test_JaxConfig.TestJaxConfiguration method) test_debug_nans_is_off() (optimism.test.test_JaxConfig.TestJaxConfiguration method) test_determinant() (optimism.test.test_TensorMath.TensorMathFixture method) test_determinant_precision() (optimism.test.test_TensorMath.TensorMathFixture method) test_detpIm1() (optimism.test.test_TensorMath.TensorMathFixture method) test_diagonal_backup_preconditioner() (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture method) test_dirichlet_patch_test() (optimism.test.test_AxisymmPatchTest.AxisymmPatchTest method) (optimism.test.test_PatchTest.LinearPatchTestLinearElements method) (optimism.test.test_ReadExodusMesh.TestMeshReadPatchTest method) (optimism.test.test_ReadMesh.TestMeshReadPatchTest method) test_dirichlet_patch_test_with_quadratic_elements() (optimism.test.test_PatchTest.LinearPatchTestQuadraticElements method) (optimism.test.test_PatchTest.QuadraticPatchTestQuadraticElements method) (optimism.test.test_PatchTestPou.PatchTestQuadraticElements method) test_dirichlet_patch_test_with_quadratic_elements_and_constant_jac_projection() (optimism.test.test_PatchTest.LinearPatchTestQuadraticElements method) test_does_not_converge_to_saddle_point() (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture method) test_dot2_on_ill_conditioned_inner_product() (optimism.test.test_Math.TestMathInnerProduct method) test_double_precision_mode_is_on() (optimism.test.test_JaxConfig.TestJaxConfiguration method) test_edge_connectivities() (optimism.test.test_Mesh.TestSingleMeshFixture method) test_edge_to_neighbor_cells_data() (optimism.test.test_Mesh.TestSingleMeshFixture method) test_eigen_sym33_non_unit() (optimism.test.test_TensorMath.TensorMathFixture method) test_eigen_sym33_non_unit_degenerate_case() (optimism.test.test_TensorMath.TensorMathFixture method) test_elastic_energy() (optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture method) (optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture method) test_elastic_strain_path() (optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture method) test_element_volume_multi_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_element_volume_single_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceSingleQuadPointFixture method) test_entity_counts() (optimism.test.test_ReadExodusMesh.TestMeshReadData method) (optimism.test.test_ReadMesh.TestMeshReadData method) test_exclusion_of_current_edge() (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) test_exclusion_of_edges_on_opposite_face() (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) test_exp_symm_at_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_exp_symm_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_exp_symm_gradient_distinct_eigenvalues() (optimism.test.test_TensorMath.TensorMathFixture method) test_exp_symm_gradient_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_exp_symm_gradient_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_exp_symm_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_find_root() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_find_root_converges_on_hard_function() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_find_root_with_forced_bisection_step() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_find_root_with_jit() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_finite_deformation_frame_indifference() (optimism.material.test.test_LinearElastic.TestLinearElasticMaterial method) test_finite_extensibility() (optimism.material.test.test_Gent.TestGentMaterial method) test_forward_track_search_of_cp_step_length_achieves_sufficient_decrease() (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) test_frame_indifference() (optimism.material.test.test_Gent.TestGentMaterial method) test_friction() (optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint method) test_friction_search_after_motion() (optimism.contact.test.test_Contact.TestContactFrictionData method) test_friction_search_static() (optimism.contact.test.test_Contact.TestContactFrictionData method) test_get_bc_size() (optimism.test.test_DofManager.DofManagerTest method) test_get_unknown_size() (optimism.test.test_DofManager.DofManagerTest method) test_globalized_newton_step_nonconvex() (optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver method) test_globalized_newton_step_with_cubic() (optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver method) test_grad_interpolation() (optimism.test.test_Interpolants.TestInterpolants method) test_grad_on_dot2_works() (optimism.test.test_Math.TestMathInnerProduct method) test_grad_on_sum2_works() (optimism.test.test_Math.TestMathSum method) test_hessian_matrix_is_symmetric() (optimism.test.test_Newmark.DynamicsFixture method) test_inclusion_of_edges_on_adjacent_face() (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) test_indefinite_fixed_by_shift() (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture method) test_inf_grad_min() (optimism.test.test_SmoothFunctions.TestSmoothFunctions method) test_inf_min() (optimism.test.test_SmoothFunctions.TestSmoothFunctions method) test_integral_both_equal_in_contact() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) test_integral_both_equal_out_of_contact() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) test_integral_both_in_contact() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) test_integral_both_out_of_contact() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) test_integral_in_out_of_contact() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) test_integral_some_in_overlap() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) test_integrate_constant_field_multi_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_integrate_constant_field_single_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceSingleQuadPointFixture method) test_integrate_function_on_surface_that_uses_coords_and_normal() (optimism.test.test_Surface.TestSingleMeshFixture method) test_integrate_linear_field_multi_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_integrate_linear_field_single_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceSingleQuadPointFixture method) test_integrate_over_half_block() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_integrate_over_half_block_indices() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_integrate_perimeter() (optimism.test.test_Surface.TestSingleMeshFixture method) test_integrate_quadratic_fn_on_surface() (optimism.test.test_Surface.TestSingleMeshFixture method) test_integrate_with_parameter() (optimism.test.test_FunctionSpace.ParameterizationTestSuite method) test_integration_of_constant_acceleration_is_exact() (optimism.test.test_Newmark.DynamicsFixture method) test_integration_of_rigid_motion_is_exact() (optimism.test.test_Newmark.DynamicsFixture method) test_internal_state_update() (optimism.material.test.test_LinearElastic.TestLinearElasticMaterial method) test_internal_variables_initialization_on_multi_block() (optimism.test.test_Mechanics.MechanicsFunctionsFixture method) test_internal_variables_update_on_multi_block() (optimism.test.test_Mechanics.MechanicsFunctionsFixture method) test_interpolation() (optimism.test.test_Interpolants.TestInterpolants method) test_invalid_entries_have_minus_one_if_included() (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) test_jit_and_jacrev_on_integration() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_jit_dot2_on_ill_conditioned_inner_product() (optimism.test.test_Math.TestMathInnerProduct method) test_jit_is_enabled() (optimism.test.test_JaxConfig.TestJaxConfiguration method) test_jit_on_integration() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_kinetic_potential_works_inside_J2() (optimism.material.test.test_RateSensitivity.RateSentivityInsideJ2 method) test_limit_of_ray_smoothing() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) test_limits() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_linear() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) test_linear_J_projection_exact_for_constant_J_field() (optimism.test.test_VolumeAverageJ.TestVolumeAverage method) test_linear_J_projection_exact_for_linear_J_field() (optimism.test.test_VolumeAverageJ.TestVolumeAverage method) test_linear_J_projection_inexact_for_quadratic_J_field() (optimism.test.test_VolumeAverageJ.TestVolumeAverage method) test_linear_reproducing_multi_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceMultiQuadPointFixture method) test_linear_reproducing_single_point_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceSingleQuadPointFixture method) test_loading_only() (optimism.material.test.test_HyperVisco.HyperViscoUniaxialStrain method) (optimism.material.test.test_MultiBranchHyperVisco.HyperViscoUniaxialStrain method) test_log_symm_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_log_symm_gradient_almost_double_degenerate() (optimism.test.test_TensorMath.TensorMathFixture method) test_log_symm_gradient_distinct_eigenvalues() (optimism.test.test_TensorMath.TensorMathFixture method) test_log_symm_gradient_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_log_symm_gradient_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_log_symm_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_logm_iss_derivatives_on_double_degenerate_eigenvalues() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_derivatives_on_triple_degenerate_eigenvalues() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_fwd_mode_derivative() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_hessian_on_double_degenerate_eigenvalues() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_jit() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_on_10x10() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_on_double_degenerate_eigenvalues() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_on_full_3x3s() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_on_matrix_near_identity() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_on_triple_degenerate_eigvalues() (optimism.test.test_LinAlg.TestLinAlg method) test_logm_iss_rev_mode_derivative() (optimism.test.test_LinAlg.TestLinAlg method) test_mass_matrix_exactly_integrated() (optimism.test.test_FunctionSpace.TestFunctionSpaceFixture method) test_mass_matrix_inexactly_integrated_with_low_order_quadrature() (optimism.test.test_FunctionSpace.TestFunctionSpaceFixture method) test_min() (optimism.test.test_SmoothFunctions.TestSmoothFunctions method) test_mortar_integral_computes_expected_area() (optimism.contact.test.test_TwoBodyMortarContact.TwoBodySelfContactFixture method) test_mortar_integral_computes_no_penetration() (optimism.contact.test.test_TwoBodyMortarContact.TwoBodySelfContactFixture method) test_multiply_by_transpose() (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture method) test_negative_curvature() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) test_negative_linear() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) test_neighbor_search_excludes_current_and_adjacent_edges() (optimism.contact.test.test_TwoBodyMortarContact.TwoBodySelfContactFixture method) test_neumann_patch_test() (optimism.test.test_PatchTest.LinearPatchTestLinearElements method) (optimism.test.test_ReadMesh.TestMeshReadPatchTest method) test_neumann_patch_test_with_quadratic_elements() (optimism.test.test_Traction.TractionPatch method) test_newton_step() (optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver method) test_node_set_sizes() (optimism.test.test_ReadExodusMesh.TestMeshReadData method) test_numpy_dot_fails_badly_on_ill_conditioned_inner_product() (optimism.test.test_Math.TestMathInnerProduct method) test_numpy_sum_fails_badly_on_ill_conditioned_sum() (optimism.test.test_Math.TestMathSum method) test_pacman_detection_1() (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) test_pacman_detection_2() (optimism.contact.test.test_NeighborSearch.SelfContactPenaltyFixture method) test_param_change() (optimism.test.test_Objective.TestObjective method) test_param_change_first_out_of_two() (optimism.test.test_Objective.TestObjective method) test_param_change_four_out_of_four() (optimism.test.test_Objective.TestObjective method) test_param_change_second_out_of_three() (optimism.test.test_Objective.TestObjective method) test_param_change_third_out_of_four() (optimism.test.test_Objective.TestObjective method) test_patch_test() (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPatch.TestSingleMeshFixture method) (optimism.test.test_Newmark.DynamicPatchTest method)

test_penalty_potential_gradient_contains_no_nan() (optimism.contact.test.test_TwoBodyMortarContact.TwoBodySelfContactFixture method) test_plastic_strain_path() (optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture method) test_plastic_stress() (optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture method) test_plasticity_with_mesh() (optimism.material.test.test_J2Plastic.PlasticityOnMesh method) test_plot() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) test_plot2() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) test_plot_smooth_min() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_plot_smoothness() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) test_positive_curvature() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) test_positive_curvature2() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) test_positive_curvature3() (optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver method) test_potential() (optimism.test.test_Newmark.DynamicsFixture method) test_pow_symm_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_pow_symm_gradient_almost_double_degenerate() (optimism.test.test_TensorMath.TensorMathFixture method) test_pow_symm_gradient_distinct_eigenvalues() (optimism.test.test_TensorMath.TensorMathFixture method) test_pow_symm_gradient_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_pow_symm_gradient_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_pow_symm_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_power_law_hardening_slope_is_finite_at_origin() (optimism.material.test.test_Hardening.PowerLawHardeningTestFixture method) test_power_law_hardening_yield_strength() (optimism.material.test.test_Hardening.PowerLawHardeningTestFixture method) test_power_law_hardening_zero_point() (optimism.material.test.test_Hardening.PowerLawHardeningTestFixture method) test_power_law_scales_correctly() (optimism.material.test.test_RateSensitivity.RateSensitivityFixture method) test_power_law_strength_increases() (optimism.material.test.test_Hardening.PowerLawHardeningTestFixture method) test_project_onto_tr_function_when_vector_is_inside_tr() (optimism.test.test_TrustRegionSPG.TestProjectionOnBoundary method) test_project_onto_tr_function_when_vector_is_outside_tr() (optimism.test.test_TrustRegionSPG.TestProjectionOnBoundary method) test_projection() (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) test_property_mins_and_maxs() (optimism.test.test_ReadExodusMesh.TestMeshReadPropertiesTest method) test_property_parsing() (optimism.material.test.test_RateSensitivity.RateSensitivityFixture method) test_right_polar_decomp() (optimism.test.test_TensorMath.TensorMathFixture method) test_root_find_is_differentiable() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_root_find_with_vmap_and_jit() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_rotation_invariance() (optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture method) (optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture method) test_shape_kronecker_delta_property() (optimism.test.test_Interpolants.TestInterpolants method) test_side_set_sizes() (optimism.test.test_ReadExodusMesh.TestMeshReadData method) test_slice_unknowns_with_dof_indices() (optimism.test.test_DofManager.DofManagerTest method) test_smooth_1() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_smooth_2() (optimism.contact.test.test_Cpp.TestEdgeIntersection method) test_smooth_gradient_on_either_side_of_left_edge() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) test_smooth_gradient_on_either_side_of_right_edge() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) test_solve() (optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint method) test_solves_quadratic_problem_in_one_iteration() (optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture method) test_solves_when_left_bracket_is_solution() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_solves_when_right_bracket_is_solution() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_some_positive_some_negative_constraints_for_small_sphere_on_edge() (optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint method) test_sparse_hessian_at_nonzero_phase() (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPatch.TestSingleMeshFixture method) test_sparse_hessian_at_zero_phase() (optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPatch.TestSingleMeshFixture method) test_sparse_matrix_patch_test_dirichlet_BC() (optimism.test.test_SparseMatrix.SparsePatchFixture method) test_sparse_matrix_patch_test_noBC() (optimism.test.test_SparseMatrix.SparsePatchFixture method) test_sparse_matrix_patch_test_traction_BC() (optimism.test.test_SparseMatrix.SparsePatchFixture method) test_sparse_solve() (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture method) test_sparse_solve_and_update() (optimism.test.test_SparsePreconditioner.SparseCholeskyFixture method) test_spg_on_rosenbrock() (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock method) test_sqrt_symm() (optimism.test.test_TensorMath.TensorMathFixture method) test_sqrt_symm_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_sqrt_symm_gradient_almost_double_degenerate() (optimism.test.test_TensorMath.TensorMathFixture method) test_sqrt_symm_gradient_distinct_eigenvalues() (optimism.test.test_TensorMath.TensorMathFixture method) test_sqrt_symm_gradient_double_eigs() (optimism.test.test_TensorMath.TensorMathFixture method) test_sqrt_symm_gradient_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_sqrt_symm_scaled_identity() (optimism.test.test_TensorMath.TensorMathFixture method) test_sqrtm() (optimism.test.test_LinAlg.TestLinAlg method) test_sqrtm_derivatives_on_10x10() (optimism.test.test_LinAlg.TestLinAlg method) test_sqrtm_fwd_mode_derivative() (optimism.test.test_LinAlg.TestLinAlg method) test_sqrtm_jit() (optimism.test.test_LinAlg.TestLinAlg method) test_sqrtm_on_10x10() (optimism.test.test_LinAlg.TestLinAlg method) test_sqrtm_on_degenerate_eigenvalues() (optimism.test.test_LinAlg.TestLinAlg method) test_sqrtm_rev_mode_derivative() (optimism.test.test_LinAlg.TestLinAlg method) test_subproblem_solve_inside_tr() (optimism.test.test_TrustRegionSPG.TestSubproblemSolveFixture method) test_subproblem_solve_on_tr_boundary() (optimism.test.test_TrustRegionSPG.TestSubproblemSolveFixture method) test_sum2_jitted_on_ill_conditioned_sum() (optimism.test.test_Math.TestMathSum method) test_sum2_on_ill_conditioned_sum() (optimism.test.test_Math.TestMathSum method) test_surface_integral_of_linears() (optimism.contact.test.test_Search.TestDoubleMeshFixture method) test_surface_integral_of_quadratics() (optimism.contact.test.test_Search.TestDoubleMeshFixture method) test_traction_patch_test() (optimism.test.test_Newmark.DynamicPatchTest method) test_tri_element_element_topological_nodesets() (optimism.test.test_Interpolants.TestInterpolants method) test_tri_face_nodes_match_1D_lobatto_nodes() (optimism.test.test_Interpolants.TestInterpolants method) test_tri_interpolant_points_in_element() (optimism.test.test_Interpolants.TestInterpolants method) test_tri_shape_partition_of_unity() (optimism.test.test_Interpolants.TestInterpolants method) test_tri_shapeGrads_partition_of_unity() (optimism.test.test_Interpolants.TestInterpolants method) test_triangle_quadrature_exactness() (optimism.test.test_QuadratureRule.TestQuadratureRules method) test_triangle_quadrature_points_in_domain() (optimism.test.test_QuadratureRule.TestQuadratureRules method) test_triangle_quadrature_weight_positivity() (optimism.test.test_QuadratureRule.TestQuadratureRules method) test_trust_region_equation_solver() (optimism.test.test_EquationSolver.EquationSolverFixture method) test_trust_region_incremental_optimizer() (optimism.test.test_EquationSolver.EquationSolverFixture method) test_trust_region_optimizer() (optimism.test.test_EquationSolver.EquationSolverFixture method) test_trust_region_optimizer_with_preconditioned_inner_products() (optimism.test.test_EquationSolver.EquationSolverFixture method) test_trust_region_spg_on_unbounded_problem() (optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture method) test_unbracketed_root_gives_nan() (optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture method) test_unconstrained_cauchy_point_achieves_sufficient_decrease() (optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture method) test_uniaxial() (optimism.material.test.test_J2Plastic.J2PlasticUniaxial method) test_uniaxial_energy() (optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture method) test_uniaxial_state_achieved() (optimism.material.test.test_MaterialUniaxialSimulator.MaterialUniaxialSimulatorFixture method) test_update_only_happens_once() (optimism.material.test.test_J2Plastic.J2UpdateFixture method) test_valid_intersection() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) test_valid_intersection_on_edge() (optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection method) test_voce_hardening_saturates_to_correct_value() (optimism.material.test.test_Hardening.VoceHardeningTestFixture method) test_voce_hardening_yield_strength() (optimism.material.test.test_Hardening.VoceHardeningTestFixture method) test_voce_hardening_zero_point() (optimism.material.test.test_Hardening.VoceHardeningTestFixture method) test_vtk_no_warning_for_inconsistent_sizes() (optimism.test.test_VTKWriter.TestVTKWriter method) test_vtk_write() (optimism.test.test_VTKWriter.TestVTKWriter method) test_vtk_writer_no_inconsistent_sizes_with_cubic_elements() (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder method) test_vtk_writer_no_inconsistent_sizes_with_quadratic_elements() (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder method) test_vtk_writer_on_cubic_elements() (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder method) test_vtk_writer_on_quadratic_elements() (optimism.test.test_VTKWriter.TestVTKWriterHigherOrder method) test_zero_point() (optimism.material.test.test_Gent.TestGentMaterial method) (optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture method) (optimism.material.test.test_LinearElastic.TestLinearElasticMaterial method) (optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture method) (optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture method) (optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture method) testAreaIntegrals() (optimism.contact.test.test_MortarGeom.TestMortarGeom method) TestBubbleInterpolants (class in optimism.test.test_Interpolants) TestContactFrictionData (class in optimism.contact.test.test_Contact) TestDoubleMeshFixture (class in optimism.contact.test.test_Search) TestEdgeIntersection (class in optimism.contact.test.test_Cpp) (class in optimism.contact.test.test_EdgeIntersection) (class in optimism.contact.test.test_IntegralPenaltyContact) testEdgesWithCommonPoint() (optimism.contact.test.test_MortarGeom.TestMortarGeom method) testEdgesWithTwoCommonPoints() (optimism.contact.test.test_MortarGeom.TestMortarGeom method) TestFixture (class in optimism.test.TestFixture) TestFunctionSpaceFixture (class in optimism.test.test_FunctionSpace) TestFunctionSpaceMultiQuadPointFixture (class in optimism.test.test_FunctionSpace) TestFunctionSpaceSingleQuadPointFixture (class in optimism.test.test_FunctionSpace) TestGentMaterial (class in optimism.material.test.test_Gent) TestGMRESSolver (class in optimism.contact.test.test_NewtonGlobalization) TestInterpolants (class in optimism.test.test_Interpolants) TestJaxConfiguration (class in optimism.test.test_JaxConfig) TestLevelsetContactConstraint (class in optimism.contact.test.test_LevelsetConstraint) TestLinAlg (class in optimism.test.test_LinAlg) TestLinearElasticMaterial (class in optimism.material.test.test_LinearElastic) TestMathInnerProduct (class in optimism.test.test_Math) TestMathSum (class in optimism.test.test_Math) TestMeshReadData (class in optimism.test.test_ReadExodusMesh) (class in optimism.test.test_ReadMesh) TestMeshReadPatchTest (class in optimism.test.test_ReadExodusMesh) (class in optimism.test.test_ReadMesh) TestMeshReadPropertiesTest (class in optimism.test.test_ReadExodusMesh) TestMinimizeScalarFixture (class in optimism.test.test_MinimizeScalar) TestMortarGeom (class in optimism.contact.test.test_MortarGeom) testMortarIntegralOneSided() (optimism.contact.test.test_MortarGeom.TestMortarGeom method) TestObjective (class in optimism.test.test_Objective) testOffEdges() (optimism.contact.test.test_MortarGeom.TestMortarGeom method) TestProjectionOnBoundary (class in optimism.test.test_TrustRegionSPG) TestQuadraticSolver (class in optimism.contact.test.test_NewtonGlobalization) TestQuadratureRules (class in optimism.test.test_QuadratureRule) TestSingleMeshFixture (class in optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch) (class in optimism.phasefield.test.test_PhaseFieldThresholdPatch) (class in optimism.test.test_Mesh) (class in optimism.test.test_Surface) TestSmoothFunctions (class in optimism.test.test_SmoothFunctions) testSpline() (optimism.contact.test.test_MortarGeom.TestMortarGeom method) TestSubproblemSolveFixture (class in optimism.test.test_TrustRegionSPG) TestTrustRegionSPGFixture (class in optimism.test.test_TrustRegionSPG) TestTrustRegionSPGRosenbrock (class in optimism.test.test_TrustRegionSPG) testUniaxial() (optimism.phasefield.test.plotPhaseFieldThresholdModel.PhaseFieldThresholdUniaxialFixture method) (optimism.phasefield.test.test_PhaseFieldUniaxial.PhaseFieldUniaxialFixture method) TestVolumeAverage (class in optimism.test.test_VolumeAverageJ) TestVTKWriter (class in optimism.test.test_VTKWriter) TestVTKWriterHigherOrder (class in optimism.test.test_VTKWriter) text (optimism.Timer.Timer attribute) time (optimism.material.MaterialUniaxialSimulator.UniaxialOutput attribute), [1] (optimism.Objective.Params attribute) time_step() (optimism.test.test_Newmark.DynamicsFixture method) Timer (class in optimism.Timer) TimerError timers (optimism.Timer.Timer attribute) times (optimism.phasefield.MaterialPointSimulator.UniaxialOutput attribute) tol (optimism.AlSolver.Settings attribute) (optimism.EquationSolver.Settings attribute) (optimism.MinimizeScalar.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) total_residual() (optimism.ConstrainedObjective.ConstrainedObjective method) tr_size (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) trace() (in module optimism.TensorMath) TractionPatch (class in optimism.test.test_Traction) triangle_inradius() (in module optimism.test.test_Mesh) triaxiality() (in module optimism.TensorMath) TRSPGCauchyPointFixture (class in optimism.test.test_TrustRegionSPG) trust_region_cg() (in module optimism.EquationSolverSubspace) trust_region_least_squares_solve() (in module optimism.EquationSolver) trust_region_minimize() (in module optimism.EquationSolver) trust_region_subspace_minimize() (in module optimism.EquationSolverSubspace) TwoBodyContactFixture (class in optimism.contact.test.test_TwoBodyContact) (class in optimism.contact.test.test_TwoBodyMortarContact) TwoBodySelfContactFixture (class in optimism.contact.test.test_TwoBodyMortarContact) TwoTryPrecondStrategy (class in optimism.Objective)

U

UniaxialOutput (class in optimism.material.MaterialUniaxialSimulator) (class in optimism.phasefield.MaterialPointSimulator) unknownIndices (optimism.FunctionSpace.DofManager attribute) unpack_fields_2D() (in module optimism.phasefield.PhaseField) unpack_gradients_2D() (in module optimism.phasefield.PhaseField) UNSIGNED_CHAR (optimism.VTKWriter.VTKDataType attribute) UNSIGNED_INT (optimism.VTKWriter.VTKDataType attribute) UNSIGNED_LONG (optimism.VTKWriter.VTKDataType attribute) UNSIGNED_SHORT (optimism.VTKWriter.VTKDataType attribute) untest_roundoff() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method) update() (in module optimism.phasefield.test.test_PhaseFieldUniaxial) (optimism.LU.LU method) (optimism.SparseCholesky.SparseCholesky method)

update_precond() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.Objective.Objective method) update_state() (in module optimism.J2PlasticPhaseField) (in module optimism.material.J2Plastic) (in module optimism.phasefield.PhaseFieldLorentzPlastic) (in module optimism.phasefield.PhaseFieldThresholdPlastic) update_step_length_squared() (in module optimism.EquationSolver) use_incremental_objective (optimism.EquationSolver.Settings attribute) (optimism.TrustRegionSPG.Settings attribute) use_newton_only (optimism.AlSolver.Settings attribute) use_preconditioned_inner_product_for_cg (optimism.EquationSolver.Settings attribute) use_preconditioned_inner_product_for_spg (optimism.TrustRegionSPG.Settings attribute) use_second_order_update (optimism.AlSolver.Settings attribute) utest_plot() (optimism.contact.test.test_IntegralPenaltyContact.TestEdgeIntersection method)

V

value() (optimism.ConstrainedObjective.ConstrainedObjective method) (optimism.Objective.Objective method) values (optimism.Interpolants.ShapeFunctions attribute), [1] vander1d() (in module optimism.Interpolants) vander2d() (in module optimism.Interpolants) vec_hessian() (optimism.Objective.Objective method) vec_jacobian_p0() (optimism.Objective.Objective method) vec_jacobian_p1() (optimism.Objective.Objective method) vec_jacobian_p2() (optimism.Objective.Objective method) vec_jacobian_p4() (optimism.Objective.Objective method)

VECTORS (optimism.VTKWriter.VTKFieldType attribute) vertexNodes (optimism.Interpolants.ParentElement attribute), [1] voce() (in module optimism.material.Hardening) VoceHardeningTestFixture (class in optimism.material.test.test_Hardening) vols (optimism.FunctionSpace.FunctionSpace attribute), [1] volume_average_J_gradient_transformation() (in module optimism.Mechanics) VTKDataType (class in optimism.VTKWriter) VTKFieldType (class in optimism.VTKWriter) VTKWriter (class in optimism.VTKWriter) VTKWriter.VTKFieldRecord (class in optimism.VTKWriter)

W

warm_start_increment() (in module optimism.WarmStart) warm_start_increment_jax_safe() (in module optimism.WarmStart) wgauss (optimism.QuadratureRule.QuadratureRule attribute)

while_loop() (in module optimism.MinimizeScalar) write() (optimism.VTKWriter.VTKWriter method) write_matrix_as_table() (in module optimism.VTKWriter) write_output() (optimism.test.test_PatchTestPou.PatchTestQuadraticElements method)

X

x_tol (optimism.ScalarRootFind.Settings attribute)

xigauss (optimism.QuadratureRule.QuadratureRule attribute)

Y

Y0 (optimism.phasefield.PhaseFieldThresholdPlastic.Properties attribute)

Z

zmax() (in module optimism.SmoothFunctions)